Accession
MI0012026
Description
Medicago truncatula
mtr-MIR2670b precursor miRNA
Sequence
1708
reads,
17.0
reads per million, 111 experiments
ugaucaaacuucuucgggauaaaauagugaguagcugacuuagggaagugaucgaccaUUGGGAUAAGUUUAAAUCUGCUauuuuuuacuccauaaacuuuuuaccguggguaaaaagauucuuguugggguauaaaaaaaaccagacuuaaauuuagcccaaggguuggugauguauuuucucCAAGAAGGUUGCUCACUAUUUuaccccaugaagauugauu
.((((((.((((...(((.(((((((((((((((((..(((.(((((((.(((((((.(((((.(((((((((.((((...((((((((((((..(((((((((((...)))))))))....))..))))))).)))))....)))).))))))))).))))).))))))).)).....))))).)))..))))))))))))))))))))...)))).))))))
.((((((.((((...(((.(((((((((((((((((..(((.(((((((.(((((((.(((((.(((((((((.((((...((((((((((((..(((((((((((...)))))))))....))..))))))).)))))....)))).))))))))).))))).))))))).)).....))))).)))..))))))))))))))))))))...)))).))))))
Structure
u a uuc a ga a ----- g a A A -CUa - ua ---- g gaucaa cuuc ggg uaaaauagugaguagcu cuu gggaa gu aucgacc UUGGG UAAGUUUAA UCUG uuuuu uacucca aa cuuuuuacc |||||| |||| ||| ||||||||||||||||| ||| ||||| || ||||||| ||||| ||||||||| |||| ||||| ||||||| || ||||||||| u uuaguu gaag ccc auUUUAUCACUCGUUGG GAA cucuu ua ugguugg aaccc auuuaaauu agac aaaaa auggggu uu gaaaaaugg - a uac - AA C uuaug g g g c caaa u ug cuua g
Annotation confidence
Low
Do you think this miRNA is real?
Genome context
chr4: 23357485-23357708 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from mtr-MIR2670b
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature mtr-miR2670b-5p
| Accession | MIMAT0054988 |
| Description | Medicago truncatula mtr-miR2670b-5p mature miRNA |
| Sequence | 59 - UUGGGAUAAGUUUAAAUCUGCU - 80 |
| Evidence |
experimental
unknown |
Mature mtr-miR2670b-3p
| Accession | MIMAT0013479 |
| Description | Medicago truncatula mtr-miR2670b-3p mature miRNA |
| Sequence | 185 - CAAGAAGGUUGCUCACUAUUU - 205 |
| Evidence |
experimental
454 [1] |
References
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