Accession
MI0012027
Description
Medicago truncatula
mtr-MIR2670c precursor miRNA
Sequence
1203
reads,
13.0
reads per million, 110 experiments
ugaucauacuucuucggggcAAAUAGUGAGUAGCCGAUUUGGGGaagugaucaaccccuaggauaaguuuaaauuuguuuuuuuuaccccagagacuuuuuaccguggcuaaaaagaucuucuuggggguauaaaaagaaccauauuuaaauuuagcccaaggguugaugauguauuuuccuCAAGAAGGUUGCUCACUAUUUuaccccaagaaagcugguc
.(((((...(((((.((((.(((((((((((((((..(((((((((((.((((((((...((.(((((((((((..((((((((((((((((((((((((((.......))))))).))))..)))))...))))))))))...))))))))))).))...)))))))).)).....)))))))))..)))))))))))))))..)))))))))...)))))
.(((((...(((((.((((.(((((((((((((((..(((((((((((.((((((((...((.(((((((((((..((((((((((((((((((((((((((.......))))))).))))..)))))...))))))))))...))))))))))).))...)))))))).)).....)))))))))..)))))))))))))))..)))))))))...)))))
Structure
u uac c -c GA ----- g cua a -uu --- -- - cc gauca uucuu gggg AAAUAGUGAGUAGCC UUUGGGGaa gu aucaaccc gg uaaguuuaaau guuuuuuuua cccca gaga cuuuuua g ||||| ||||| |||| ||||||||||||||| ||||||||| || |||||||| || ||||||||||| |||||||||| ||||| |||| ||||||| u cuggu aagaa cccc UUUAUCACUCGUUGG GAACuccuu ua uaguuggg cc auuuaaauuua caagaaaaau ggggu uucu gaaaaau g - cga - au AA uuaug g aac g uac aug uc a cg
Annotation confidence
Medium
Do you think this miRNA is real?
Genome context
chr5: 10276042-10276263 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from mtr-MIR2670c
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature mtr-miR2670c-5p
| Accession | MIMAT0054989 |
| Description | Medicago truncatula mtr-miR2670c-5p mature miRNA |
| Sequence | 21 - AAAUAGUGAGUAGCCGAUUUGGGG - 44 |
| Evidence |
experimental
unknown |
Mature mtr-miR2670c-3p
| Accession | MIMAT0013480 |
| Description | Medicago truncatula mtr-miR2670c-3p mature miRNA |
| Sequence | 183 - CAAGAAGGUUGCUCACUAUUU - 203 |
| Evidence |
experimental
454 [1] |
References
|
