Accession
MI0011896
Description
Medicago truncatula
mtr-MIR2592a precursor miRNA
Literature search
1 open access papers mention mtr-MIR2592a
(2 sentences)
(2 sentences)
Sequence
43225
reads,
311.0
reads per million, 111 experiments
agauaaauucaaaccugccaaacaacaugagucacgcauuucgcccggcauucauguuuuccuuugaaaagaauaaauuuuuguuaggugugcuuuagauaaugguauucaauugccaaugaaAUGAGGUUCAUUCCUUGACACUUAauaccuucaucuaaaccaaccuaacaagaauuuaguauuuucaaaggaaaaacaugaaugucgagCGAAAUGCUUGAGUCCUGUUGuuuggcagguuugaauuuauc
.((((((((((((((((((((((((((.((.(((.(((((((((.(((((((((((((((((((((((((...((((((((((((((((.((.(((((((...((((((.((.((.(((.(((.(((...)))))).))).)).))))))))...))))))).))))))))))))))))))...)))))))))).))))))))))))))).))))))))).))).)).))))))))))))))))))))))))))
.((((((((((((((((((((((((((.((.(((.(((((((((.(((((((((((((((((((((((((...((((((((((((((((.((.(((((((...((((((.((.((.(((.(((.(((...)))))).))).)).))))))))...))))))).))))))))))))))))))...)))))))))).))))))))))))))).))))))))).))).)).))))))))))))))))))))))))))
Structure
a u g c c - gaa g c aau c u c u A G gauaaauucaaaccugccaaacaaca ga uca gcauuucgc cggcauucauguuuu ccuuugaaaa uaaauuuuuguuaggu ug uuuagau gguauu aa ug caa gaa UGA |||||||||||||||||||||||||| || ||| ||||||||| ||||||||||||||| |||||||||| |||||||||||||||| || ||||||| |||||| || || ||| ||| ||| G cuauuuaaguuuggacgguuuGUUGU CU AGU CGUAAAGCg gcuguaaguacaaaa ggaaacuuuu auuuaagaacaaucca ac aaaucua ccauaA UU AC GUU CUU ACU - C G U a a aug - c cuu - C A C - U
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
chr1: 28276324-28276577 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from mtr-MIR2592a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature mtr-miR2592a-3p
| Accession | MIMAT0013349 |
| Description | Medicago truncatula mtr-miR2592a-3p mature miRNA |
| Sequence | 213 - CGAAAUGCUUGAGUCCUGUUG - 233 |
| Evidence |
experimental
454 [1] |
References
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