miRBase entry: 21762498

Identification of drought-responsive microRNAs in Medicago truncatula by genome-wide high-throughput sequencing

PubMed ID 21762498
Authors Wang T, Chen L, Zhao M, Tian Q, Zhang WH
Journal BMC Genomics
Volume 12
Pages 367

There are 139 miRNAs associated with this paper:
Name Accession RPM Chromosome Start End Strand Confidence
mtr-MIR2592a MI0011896 None chr1 28276324 28276577 + -
mtr-MIR5213 MI0018253 None chr2 18000286 18000398 + High
mtr-MIR4414a MI0018312 None chr1 31864157 31864260 - High
mtr-MIR2643b MI0018354 None chr5 41256981 41257072 - High
mtr-MIR2111f MI0018360 None chr7 16671474 16671589 - High
mtr-MIR172b MI0018368 None AC235487.1 197953 198066 + High
mtr-MIR172c MI0018369 None AC233663.2 10169 10307 + High
mtr-MIR156j MI0018375 None chr1 3468974 3469076 + High
mtr-MIR5554a MI0019075 None chr1 32660180 32660284 - High
mtr-MIR5555 MI0019076 None chr1 13399421 13399515 - Low
mtr-MIR2619b MI0019077 None chr4 7493105 7493275 + Medium
mtr-MIR2592bl MI0019078 None chr4 20867262 20867391 + Low
mtr-MIR5554b MI0019079 None chr8 29332267 29332371 + Low
mtr-MIR5274b MI0019080 None chr4 12634036 12634130 + High
mtr-MIR5556 MI0019081 None chr4 25278547 25278667 - High
mtr-MIR2592bm MI0019082 None chr5 2926606 2926798 + High
mtr-MIR5557 MI0019083 None chr5 5907137 5907451 + Medium
mtr-MIR2592bn MI0019084 None chr5 8281152 8281345 + High
mtr-MIR5558 MI0019085 None chr5 19731787 19731872 + High
mtr-MIR5559 MI0019086 None chr6 1058333 1058470 + Medium
mtr-MIR5560 MI0019087 None chr6 4372015 4372125 + Low
mtr-MIR5554c MI0019088 None chr7 22600323 22600427 - Low
mtr-MIR5561 MI0019089 None chr7 33922012 33922100 - High
mtr-MIR5562 MI0019090 None chr8 11508769 11508992 + Low
mtr-MIR5563 MI0019091 None chr4 42479761 42479861 + Medium
mtr-MIR167b MI0019092 None chr7 37444819 37445025 + High
mtr-MIR168c MI0019093 None chr5 10278669 10278794 + High
mtr-MIR408 MI0019094 None chr1 22930123 22930247 + High
mtr-MIR2111a MI0019095 None None None High
mtr-MIR166a MI0001740 None chr1 19059643 19059763 - High
mtr-MIR169a MI0001741 None contig_79842 860 980 + High
mtr-MIR399b MI0001743 None chr6 21517100 21517211 - Medium
mtr-MIR399d MI0001744 None chr6 21504277 21504405 - High
mtr-MIR399c MI0001748 None chr8 24010865 24010983 - -
mtr-MIR399a MI0001749 None chr8 23163782 23163915 - -
mtr-MIR399e MI0001750 None chr8 23175117 23175250 - -
mtr-MIR156a MI0001752 None contig_50145 402 861 - -
mtr-MIR171a MI0001753 None contig_164461 1012 1125 - High
mtr-MIR156b MI0005571 None chr1 4445878 4445972 - High
mtr-MIR164a MI0005573 None chr1 23983784 23983882 + High
mtr-MIR166b MI0005575 None chr2 950526 950695 - High
mtr-MIR169c MI0005577 None chr2 13450873 13450957 + High
mtr-MIR169d MI0005578 None chr2 13468364 13468603 + High
mtr-MIR169e MI0005579 None chr2 13473516 13473616 + High
mtr-MIR171b MI0005580 None chr2 27393335 27393428 + High
mtr-MIR166c MI0005581 None chr3 33641974 33642078 - High
mtr-MIR166d MI0005582 None chr3 33642148 33642238 - Medium
mtr-MIR169f MI0005583 None chr3 34270912 34271050 + High
mtr-MIR156c MI0005584 None chr3 36762577 36762674 + High
mtr-MIR156d MI0005585 None chr3 37487558 37487647 - High
mtr-MIR399f MI0005587 None chr8 23166508 23166611 - -
mtr-MIR399g MI0005588 None chr8 23158805 23158908 - -
mtr-MIR399h MI0005589 None chr8 23153129 23153218 + -
mtr-MIR399i MI0005590 None chr8 24171964 24172053 - -
mtr-MIR399j MI0005591 None chr8 24001880 24001970 + -
mtr-MIR399k MI0005592 None chr8 24004937 24005030 - -
mtr-MIR166e MI0005594 None chr8 27465367 27465472 - High
mtr-MIR156e MI0005595 None chr8 31820126 31820297 + High
mtr-MIR171c MI0005597 None chr5 8935780 8935884 + High
mtr-MIR398a MI0005599 None chr5 18765673 18765770 - High
mtr-MIR398b MI0005602 None chr5 37723218 37723304 + High
mtr-MIR169g MI0005604 None chr6 3029966 3030176 + High
mtr-MIR156f MI0005605 None chr6 4845679 4845772 - High
mtr-MIR399l MI0005606 None chr6 10453456 10453534 - -
mtr-MIR156g MI0005607 None chr6 18847298 18847417 - High
mtr-MIR399m MI0005608 None chr6 21530943 21531027 - High
mtr-MIR399n MI0005609 None chr6 21480330 21480429 - High
mtr-MIR399o MI0005610 None chr6 21465345 21465436 - High
mtr-MIR398c MI0005611 None chr7 3345232 3345318 - High
mtr-MIR164b MI0005612 None chr7 19001248 19001391 + High
mtr-MIR156h MI0005613 None chr7 24257584 24257677 + High
mtr-MIR166f MI0005614 None chr7 26018024 26018202 - High
mtr-MIR164c MI0005616 None chr7 36370118 36370203 - High
mtr-MIR164d MI0005617 None chr8 5531977 5532048 + High
mtr-MIR166g MI0005618 None chr8 6508264 6508370 - High
mtr-MIR171d MI0005619 None chr8 20063684 20063788 - High
mtr-MIR171e MI0005620 None chr4 39704652 39704744 + High
mtr-MIR396a MI0005621 None chr4 39789612 39789704 + High
mtr-MIR396b MI0005622 None chr4 39798253 39798347 - High
mtr-MIR169h MI0005623 None chr4 44360866 44360951 - High
mtr-MIR169b MI0005625 None None None High
mtr-MIR156i MI0005626 None chr4 46126859 46126951 - High
mtr-MIR171f MI0005627 None chr4 46694027 46694121 - High
mtr-MIR399p MI0005634 None None None -
mtr-MIR2086 MI0010539 None chr2 31686255 31686356 - High
mtr-MIR1510b MI0010540 None chr5 18612353 18612588 + High
mtr-MIR1507 MI0010541 None chr4 46264970 46265113 + High
mtr-MIR1510a MI0010542 None chr5 18616293 18616456 + High
mtr-MIR2089 MI0010546 None chr5 18629430 18629592 + High
mtr-MIR2118 MI0010858 None AC235678.1 74374 74532 - High
mtr-MIR169k MI0011795 None None None High
mtr-MIR2111c MI0011836 None chr7 16686087 16686193 - High
mtr-MIR2111d MI0011838 None None None High
mtr-MIR2111e MI0011839 None chr7 16678770 16678875 - High
mtr-MIR2111g MI0011841 None None None High
mtr-MIR2111h MI0011842 None chr7 16655725 16655830 - High
mtr-MIR2111i MI0011843 None None None High
mtr-MIR2111m MI0011844 None chr7 16637685 16637791 - High
mtr-MIR2111n MI0011846 None chr7 16637529 16637662 - High
mtr-MIR2111o MI0011847 None chr7 16621471 16621577 - High
mtr-MIR169j MI0011868 None chr2 13454079 13454208 + High
mtr-MIR2111b MI0011905 None None None High
mtr-MIR2111j MI0011907 None chr7 16649192 16649293 - High
mtr-MIR2111k MI0011908 None chr7 16644233 16644366 - High
mtr-MIR2630a MI0011917 None chr3 40621429 40621657 + Low
mtr-MIR2630b MI0011918 None chr1 552478 552706 - Low
mtr-MIR2630c MI0011919 None chr1 23684220 23684449 - Low
mtr-MIR2630w MI0011920 None chr1 23684222 23684450 + Medium
mtr-MIR2630x MI0011921 None chr1 27586224 27586451 + Medium
mtr-MIR2630y MI0011922 None chr2 11627635 11627860 - Medium
mtr-MIR2630d MI0011923 None chr3 23128153 23128381 - Low
mtr-MIR2630e MI0011924 None chr3 37979010 37979238 - Low
mtr-MIR2630f MI0011925 None chr3 38109549 38109777 + Low
mtr-MIR2630g MI0011926 None chr3 28083847 28084075 + Low
mtr-MIR2630h MI0011927 None chr5 3355277 3355505 + Low
mtr-MIR2630i MI0011928 None chr4 1908805 1909032 - Low
mtr-MIR2630j MI0011929 None chr4 9612541 9612769 - Low
mtr-MIR2630k MI0011930 None chr4 9694217 9694445 - Low
mtr-MIR2630l MI0011931 None chr5 15543381 15543609 + Low
mtr-MIR2630m MI0011932 None chr5 18370582 18370811 - Low
mtr-MIR2630n MI0011933 None chr5 5676117 5676345 - Low
mtr-MIR2630o MI0011934 None chr5 6240185 6240412 + Low
mtr-MIR2630p MI0011935 None chr4 4799279 4799508 + Low
mtr-MIR2630q MI0011936 None chr6 18839111 18839338 - Low
mtr-MIR2630r MI0011937 None chr6 11208478 11208706 - Low
mtr-MIR2630s MI0011938 None chr7 31925699 31925927 + Low
mtr-MIR2630t MI0011939 None chr7 208036 208264 - Low
mtr-MIR2630u MI0011940 None chr8 20150884 20151112 + Low
mtr-MIR2630v MI0011941 None chr4 38608657 38608885 + Low
mtr-MIR399q MI0012024 None chr1 30126820 30126993 + High
mtr-MIR2111l MI0018359 None None None -
mtr-MIR171h MI0018372 None chr3 31404708 31404816 - High
mtr-MIR399r MI0018374 None chr8 24012653 24012754 + -
mtr-MIR396c MI0019664 None chr1 3016845 3016978 - High
mtr-MIR171g MI0019677 None None None High
mtr-MIR169i MI0025203 None None None High
mtr-MIR169l MI0025230 None None None High
mtr-MIR399s MI0025231 None chr8 23989511 23989633 + -
mtr-MIR399t MI0025232 None chr8 24156521 24156643 + -



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