Stem-loop mtr-MIR171c

Accession

MI0005597

Description

Medicago truncatula mtr-MIR171c precursor miRNA

Literature search

8 open access papers mention mtr-MIR171c
(60 sentences)

Sequence

28044 reads, 115.0 reads per million, 111 experiments

auugagaUAUUGGCUUGGUUCACUCAGAagaaacaaaaaauaacacuacuugugaauguuuugauuuugauuuugauuuUGAUUGAGCCGUGCCAAUAUUucaaa
.(((((((((((((.(((((((.(((((((((((((((((((.(((.....)))..))))....))))).))))..)))))).))))))).))))))))))))).

Structure

a             U       C      --    -     ----    -a   u 
 uugagaUAUUGGC UGGUUCA UCAGAa  gaaa caaaa    aaua  cac a
 ||||||||||||| ||||||| ||||||  |||| |||||    ||||  ||| c
 aacuUUAUAACCG GCCGAGU AGUuuu  uuuu guuuu    uugu  gug u
a             U       U      ag    a     aguu    aa   u 

Annotation confidence High

Genome context

chr5: 8935780-8935884 [+]

Mature mtr-miR171c-5p

• Accession: MIMAT0054772
• Description: Medicago truncatula mtr-miR171c-5p mature miRNA
• Sequence: 8 - UAUUGGCUUGGUUCACUCAGA - 28
• Evidence: experimental ; unknown

Mature mtr-miR171c-3p

• Accession: MIMAT0011083
• Description: Medicago truncatula mtr-miR171c-3p mature miRNA
• Sequence: 80 - UGAUUGAGCCGUGCCAAUAUU - 100
• Evidence: not_experimental

References

1. 
   "Bonnet E"
   (2007) None: