Accession
MI0005582
Description
Medicago truncatula
mtr-MIR166d precursor miRNA
Literature search
9 open access papers mention mtr-MIR166d
(42 sentences)
(42 sentences)
Sequence
1448
reads,
10.0
reads per million, 106 experiments
guugaggGGAAUGUUGCCUGGCUCaaggcuuuucauaguuugaucuaucuacuaugauuaaggcuUCGGGCCAGGCUUCAUcccccucaaa
.((((((((.(((..(((((((((.((((((((((((((..((....)).)))))))..))))))).)))))))))..))).)))))))).
.((((((((.(((..(((((((((.((((((((((((((..((....)).)))))))..))))))).)))))))))..))).)))))))).
Structure
g A UU a -- uu u uugaggGG AUG GCCUGGCUC aggcuuu ucauagu ga c |||||||| ||| ||||||||| ||||||| ||||||| || aacucccc UAC CGGACCGGG Uucggaa aguauca cu u a c UU C uu -u a
Annotation confidence
Medium
Do you think this miRNA is real?
Genome context
chr3: 33642148-33642238 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from mtr-MIR166d
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature mtr-miR166d-5p
| Accession | MIMAT0054767 |
| Description | Medicago truncatula mtr-miR166d-5p mature miRNA |
| Sequence | 8 - GGAAUGUUGCCUGGCUC - 24 |
| Evidence |
experimental
unknown |
Mature mtr-miR166d-3p
| Accession | MIMAT0011068 |
| Description | Medicago truncatula mtr-miR166d-3p mature miRNA |
| Sequence | 66 - UCGGGCCAGGCUUCAU - 81 |
| Evidence | not_experimental |
