Stem-loop mtr-MIR2592bm

Accession

MI0019082

Description

Medicago truncatula mtr-MIR2592bm precursor miRNA

Literature search

1 open access papers mention mtr-MIR2592bm
(2 sentences)

Sequence

cucaagcauuucgCUCGGCAUUCAUGUUUUUCCUUugaaaagauuaaauucuuguuagguugauuuagaugaauguauuaagugucaaugaaugaaccuuauuuguuggcacuugaauaucaucaucuaaaacaagcguagcaaaaauuuauucuuuucaaaGGAAAACAUGAAUGUCGGGUGaaaugcuuga
.(((((((((((((((((((((((((((((.((((((((((((.((((((.((((((.((((.(((((((((..(((((((((((((((((((((...))))))))))))))))).))))..))))))))).).))).)))))).)))))).)))))))))))))))))))))))))))))))))))))))))

Structure

c                             U            u      c      g   - a         au    -                 a 
 ucaagcauuucgCUCGGCAUUCAUGUUUU CCUUugaaaaga uaaauu uuguua guu g uuuagauga  guau uaagugucaaugaauga  
 ||||||||||||||||||||||||||||| |||||||||||| |||||| |||||| ||| | |||||||||  |||| ||||||||||||||||| c
 aguucguaaaGUGGGCUGUAAGUACAAAA GGaaacuuuucu auuuaa aacgau cga c aaaucuacu  uaua guucacgguuguuuauu  
-                             -            u      a      g   a a         ac    a                 c 

Annotation confidence Not enough data

Genome context

chr5: 2926606-2926798 [+]

Mature mtr-miR2592bm-5p

• Accession: MIMAT0022213
• Description: Medicago truncatula mtr-miR2592bm-5p mature miRNA
• Sequence: 14 - CUCGGCAUUCAUGUUUUUCCUU - 35
• Evidence: experimental ; Illumina [1]

Mature mtr-miR2592bm-3p

• Accession: MIMAT0022214
• Description: Medicago truncatula mtr-miR2592bm-3p mature miRNA
• Sequence: 163 - GGAAAACAUGAAUGUCGGGUG - 183
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21762498
   Identification of drought-responsive microRNAs in Medicago truncatula by genome-wide high-throughput sequencing
   Wang T, Chen L, Zhao M, Tian Q, Zhang WH
   BMC Genomics (2011) 12:367