Stem-loop mtr-MIR156b

Accession

MI0005571

Description

Medicago truncatula mtr-MIR156b precursor miRNA

Literature search

11 open access papers mention mtr-MIR156b
(80 sentences)

Sequence

874651 reads, 4136.0 reads per million, 111 experiments

ggaggUGACAGAAGAGAGUGAGCACAcaugguacuuucguguaugauguuucauucucgaagcuauguguGCUCACUCUCUAUCUGUCACCccau
((.(((((((((((((((((((((((((((((...((((.(.((((....)))).).)))))))))))))))))))))))).)))))))))))..

Structure

--  a         -                    acu    u u    u 
  gg ggUGACAGA AGAGAGUGAGCACAcauggu   uucg g auga g
  || ||||||||| ||||||||||||||||||||   |||| | ||||  
  cc CCACUGUCU UCUCUCACUCGuguguaucg   aagc c uacu u
ua  -         A                    ---    u u    u 

Annotation confidence High

Genome context

chr1: 4445878-4445972 [-]

Mature mtr-miR156b-5p

• Accession: MIMAT0011057
• Description: Medicago truncatula mtr-miR156b-5p mature miRNA
• Sequence: 6 - UGACAGAAGAGAGUGAGCACA - 26
• Evidence: experimental ; Illumina [2]

Mature mtr-miR156b-3p

• Accession: MIMAT0026723
• Description: Medicago truncatula mtr-miR156b-3p mature miRNA
• Sequence: 71 - GCUCACUCUCUAUCUGUCACC - 91
• Evidence: experimental ; Illumina [2]

References

1. 
   "Bonnet E"
   (2007) None:


2. PubMed ID: 23572382
   microRNA profiling of root tissues and root forming explant cultures in Medicago truncatula
   "Eyles RP, Williams PH, Ohms SJ, Weiller GF, Ogilvie HA, Djordjevic MA, Imin N"
   "Planta (2013) 238:91-105