Stem-loop mtr-MIR2111a

Accession

MI0019095

Description

Medicago truncatula mtr-MIR2111a precursor miRNA

Literature search

2 open access papers mention mtr-MIR2111a
(8 sentences)

Sequence

uauauugggaucagaugagaUAAUCUGCAUCCUGAGGUUUAgaacaaccgaugcgucacugugucuaAGCCUUGGAAUGCAGAUUAUCucuuccuuaucaccaaugca
..(((((((((..((.((((((((((((((.(((((((((((((((.............))).)))))))))))).)))))))))))))).))...))).))))))..

Structure

ua      -   -ca  u              C            -   accga 
  uauugg gau   ga gagaUAAUCUGCAU CUGAGGUUUAga aca     u
  |||||| |||   || |||||||||||||| |||||||||||| |||     g
  guaacc cua   cu cuCUAUUAGACGUA GGUUCCGAaucu ugu     c
ac      a   uuc  u              A            g   cacug 

Annotation confidence Not enough data

Genome context

Unknown

Mature mtr-miR2111a-5p

• Accession: MIMAT0022239
• Description: Medicago truncatula mtr-miR2111a-5p mature miRNA
• Sequence: 21 - UAAUCUGCAUCCUGAGGUUUA - 41
• Evidence: experimental ; Illumina [1]

Mature mtr-miR2111a-3p

• Accession: MIMAT0022240
• Description: Medicago truncatula mtr-miR2111a-3p mature miRNA
• Sequence: 68 - AGCCUUGGAAUGCAGAUUAUC - 88
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21762498
   Identification of drought-responsive microRNAs in Medicago truncatula by genome-wide high-throughput sequencing
   Wang T, Chen L, Zhao M, Tian Q, Zhang WH
   BMC Genomics (2011) 12:367