miRBase entry: mtr-MIR166g

Stem-loop mtr-MIR166g


Accession
MI0005618
Description
Medicago truncatula mtr-MIR166g precursor miRNA
Gene family
MIPF0000004; MIR166

Literature search
9 open access papers mention mtr-MIR166g
(40 sentences)

Sequence

uuugaggGGAAUGUUGUCUGGCUCGAGGacgcuuucuucucgaucuaaugcaaauuuguggucauggauuguaaaguauucUCGGACCAGGCUUCAUUCCCCccaau
.(((.((((((((..((((((.(((((((.(((((.....(((((((..((.........))..))))))).))))).))))))).))))))..)))))))).))).

Structure
u   a        UU      C       c     cuucu       au  aaa 
 uug ggGGAAUG  GUCUGG UCGAGGa gcuuu     cgaucua  gc   u
 ||| ||||||||  |||||| ||||||| |||||     |||||||  ||   u
 aac CCCCUUAC  CGGACC GGCUcuu ugaaa     guuaggu  ug   u
u   c        UU      A       a     ----u       ac  gug 


Annotation confidence Not enough data
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Genome context
chr8: 6508264-6508370 [-]

Database links

Mature mtr-miR166g-3p

Accession MIMAT0011104
Description Medicago truncatula mtr-miR166g-3p mature miRNA
Sequence 82 - UCGGACCAGGCUUCAUUCCCC - 102
Evidence experimental
Illumina [2]

Mature mtr-miR166g-5p

Accession MIMAT0026730
Description Medicago truncatula mtr-miR166g-5p mature miRNA
Sequence 8 - GGAAUGUUGUCUGGCUCGAGG - 28
Evidence experimental
Illumina [2]

References


  1. "Bonnet E"
    (2007) None:

  2. PubMed ID: 23572382
    microRNA profiling of root tissues and root forming explant cultures in Medicago truncatula
    "Eyles RP, Williams PH, Ohms SJ, Weiller GF, Ogilvie HA, Djordjevic MA, Imin N"
    "Planta (2013) 238:91-105