Stem-loop mtr-MIR156i

Accession

MI0005626

Description

Medicago truncatula mtr-MIR156i precursor miRNA

Literature search

11 open access papers mention mtr-MIR156i
(78 sentences)

Sequence

835892 reads, 3753.0 reads per million, 111 experiments

gauauUGACAGAAGAGAGUGAGCACAugcugcagugauuguaugauagcauacaauucuuggugcguGCUCACUUCUCUUUCUGUCAUCUuau
.....((((((((((((((((((((.(((((.((.(((((((((....)))))))))))))))).)))))))).)))).))))))))......

Structure

-gauau        -    -        A     c  u         a 
      UGACAGAA GAGA GUGAGCAC ugcug ag gauuguaug u
      |||||||| |||| |||||||| ||||| || |||||||||  
      ACUGUCUU CUCU CACUCGug guggu uc uuaacauac a
uauUCU        U    U        c     -  -         g 

Annotation confidence High

Genome context

chr4: 46126859-46126951 [-]

Mature mtr-miR156i-5p

• Accession: MIMAT0011112
• Description: Medicago truncatula mtr-miR156i-5p mature miRNA
• Sequence: 6 - UGACAGAAGAGAGUGAGCACA - 26
• Evidence: experimental ; Illumina [2]

Mature mtr-miR156i-3p

• Accession: MIMAT0026733
• Description: Medicago truncatula mtr-miR156i-3p mature miRNA
• Sequence: 68 - GCUCACUUCUCUUUCUGUCAUCU - 90
• Evidence: experimental ; Illumina [2]

References

1. 
   "Bonnet E"
   (2007) None:


2. PubMed ID: 23572382
   microRNA profiling of root tissues and root forming explant cultures in Medicago truncatula
   "Eyles RP, Williams PH, Ohms SJ, Weiller GF, Ogilvie HA, Djordjevic MA, Imin N"
   "Planta (2013) 238:91-105