Stem-loop mtr-MIR164b

Accession

MI0005612

Description

Medicago truncatula mtr-MIR164b precursor miRNA

Literature search

4 open access papers mention mtr-MIR164b
(64 sentences)

Sequence

caagaUGGAGAAGCAGGGCACGUGCAauacuaacucaugaacauacacacaugauggaagugaauacaaagagaaucuacauucucuuauguuucauuuuuuuaauugaguuaguucuucaugugccccucuuccccaucauga
((.(((((.((((..(((((((((....(((((((((..................(((((((((.(((((((((((....)))))))).)))))))))))).....)))))))))....)))))))))..)))).))))).)).

Structure

-  a     A    CA         CAau         ugaacauacacacaugau         u   -        c 
 ca gaUGG GAAG  GGGCACGUG    acuaacuca                  ggaagugaa aca aagagaau u
 || ||||| ||||  |||||||||    |||||||||                  ||||||||| ||| ||||||||  
 gu cuacc cuuc  cccguguac    ugauugagu                  uuuuuacuu ugu uucucuua a
a  a     c    uc         uucu         -------------uaauu         -   a        c 

Annotation confidence Not enough data

Genome context

chr7: 19001248-19001391 [+]

Mature mtr-miR164b

• Accession: MIMAT0011098
• Description: Medicago truncatula mtr-miR164b mature miRNA
• Sequence: 6 - UGGAGAAGCAGGGCACGUGCA - 26
• Evidence: experimental ; 454 [2], Northern [2]

References

1. PubMed ID: 19555436
   Cloning and characterization of small RNAs from Medicago truncatula reveals four novel legume-specific microRNA families
   "Jagadeeswaran G, Zheng Y, Li YF, Shukla LI, Matts J, Hoyt P, Macmil SL, Wiley GB, Roe BA, Zhang W, Sunkar R"
   "New Phytol (2009) 184:85-98


2. 
   "Bonnet E"
   (2007) None: