miRBase entry: mtr-MIR399h

Stem-loop mtr-MIR399h


Accession
MI0005589
Description
Medicago truncatula mtr-MIR399h precursor miRNA

Literature search
9 open access papers mention mtr-MIR399h
(25 sentences)

Sequence

aaugauagagcaaaucucuauuggcagaacgaaguagaaagcuuggacaugcaugcuucugguuUGCCAAAGGAGAUUUGCCCUGccauu
((((.(((.((((((((((.((((((((.(((((((....((........)).)))))).).)))))))).)))))))))).))).))))

Structure
    a   a          a        a -      gaaa  uug 
aaug uag gcaaaucucu uuggcaga c gaagua    gc   g
|||| ||| |||||||||| |||||||| | ||||||    ||    
uuac GUC CGUUUAGAGG AACCGUuu g cuucgu    cg   a
    c   C          A        g u      ---a  uac 


Annotation confidence Not enough data
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Genome context
chr8: 23153129-23153218 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from mtr-MIR399h
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mtr-miR399h

Accession MIMAT0011075
Description Medicago truncatula mtr-miR399h mature miRNA
Sequence 65 - UGCCAAAGGAGAUUUGCCCUG - 85
Evidence not_experimental

References


  1. "Bonnet E"
    (2007) None: