Stem-loop mtr-MIR5555

Accession

MI0019076

Description

Medicago truncatula mtr-MIR5555 precursor miRNA

Sequence

758 reads, 8.0 reads per million, 102 experiments

uacauguaucuaagaguauaaUAUGACUUUGAUUAUGACACACUUugagugauguugccauaaucgaagUCGUAUUACACUCUUAGAUACaucaa
...((((((((((((((.((((((((((((((((((((((((((...)))).)))...))))))))))))))))))).))))))))))))))...

Structure

uac              a                   ---   -    U 
   auguaucuaagagu uaaUAUGACUUUGAUUAUG   ACA CACU  
   |||||||||||||| |||||||||||||||||||   ||| |||| u
   uaCAUAGAUUCUCA AUUAUGCUgaagcuaauac   ugu guga  
aac              C                   cgu   a    g 

Annotation confidence Low

Genome context

chr1: 13399421-13399515 [-]

Mature mtr-miR5555-5p

• Accession: MIMAT0022201
• Description: Medicago truncatula mtr-miR5555-5p mature miRNA
• Sequence: 22 - UAUGACUUUGAUUAUGACACACUU - 45
• Evidence: experimental ; Illumina [1]

Mature mtr-miR5555-3p

• Accession: MIMAT0022202
• Description: Medicago truncatula mtr-miR5555-3p mature miRNA
• Sequence: 70 - UCGUAUUACACUCUUAGAUAC - 90
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21762498
   Identification of drought-responsive microRNAs in Medicago truncatula by genome-wide high-throughput sequencing
   Wang T, Chen L, Zhao M, Tian Q, Zhang WH
   BMC Genomics (2011) 12:367