Stem-loop mtr-MIR5555

Accession

MI0019076

Description

Medicago truncatula mtr-MIR5555 precursor miRNA

Sequence

uacauguaucUAAGAGUAUAAUAUGACUUUGauuaugacacacuuugagugauguugccauaaucgAAGUCGUAUUACACUCUUAGAuacaucaa
...((((((((((((((.((((((((((((((((((((((((((...)))).)))...))))))))))))))))))).))))))))))))))...

Structure

uac              A                   ---   -    u 
   auguaucUAAGAGU UAAUAUGACUUUGauuaug   aca cacu  
   |||||||||||||| |||||||||||||||||||   ||| |||| u
   uacauAGAUUCUCA AUUAUGCUGAAgcuaauac   ugu guga  
aac              C                   cgu   a    g 

Annotation confidence Not enough data

Genome context

chr1: 13399421-13399515 [-]

Mature mtr-miR5555-5p

• Accession: MIMAT0022201
• Description: Medicago truncatula mtr-miR5555-5p mature miRNA
• Sequence: 11 - UAAGAGUAUAAUAUGACUUUG - 31
• Evidence: experimental ; Illumina [1]

Mature mtr-miR5555-3p

• Accession: MIMAT0022202
• Description: Medicago truncatula mtr-miR5555-3p mature miRNA
• Sequence: 67 - AAGUCGUAUUACACUCUUAGA - 87
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21762498
   Identification of drought-responsive microRNAs in Medicago truncatula by genome-wide high-throughput sequencing
   Wang T, Chen L, Zhao M, Tian Q, Zhang WH
   BMC Genomics (2011) 12:367