Stem-loop mtr-MIR399e

Accession

MI0001750

Description

Medicago truncatula mtr-MIR399e precursor miRNA

Literature search

9 open access papers mention mtr-MIR399e
(22 sentences)

Sequence

uccaaguugcaguugaauuacagggugaguucuccauuggcagguagcuagccacuauaugauaugcauugcaaucaucacuuaguguguaaucUGCCAAAGGAGAUUUGCCCAGcgauucucaugcaacucua
....(((((((...(((((.(.((((((((.((((.(((((((((...((..(((((..((((.(((...)))...))))..)))))..))))))))))).)))))))))))).).)))))...)))))))...

Structure

ucca       guu     a a        u    a         agc  gc     ua    --a   a 
    aguugca   gaauu c gggugagu cucc uuggcaggu   ua  cacua  ugau   ugc  
    |||||||   ||||| | |||||||| |||| |||||||||   ||  |||||  ||||   ||| u
    ucaacgu   cuuag G CCCGUUUA GAGG AACCGUcua   au  gugau  acua   acg  
-auc       acu     c A        -    A         ---  gu     uc    cua   u 

Annotation confidence Not enough data

Genome context

chr8: 23175117-23175250 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mtr-MIR399e

Mature mtr-miR399e

• Accession: MIMAT0001652
• Description: Medicago truncatula mtr-miR399e mature miRNA
• Sequence: 95 - UGCCAAAGGAGAUUUGCCCAG - 115
• Evidence: not_experimental

References

1. Conservation and divergence of microRNA families in plants
   "Dezulian T, Palatnik JF, Huson DH, Weigel D"
   Genome Biol. (2005) 6:P13