Accession
MI0011936
Description
Medicago truncatula
mtr-MIR2630q precursor miRNA
Literature search
2 open access papers mention mtr-MIR2630q
(2 sentences)
(2 sentences)
Sequence
30142
reads,
264.0
reads per million, 111 experiments
ccaugcaaauauauaauauuUGGUUUUGGUCCUUGGUAUUUuguuuuaauccuuguaaaaucauuucauauugaaauuggucccuauaauauucauuuuaguccucguuuugagggacuaaaaucaaauauucuacauauuacaaggaccaaauccaauaugaaucaAUUUUACAAGGACUAAAAcaaaauaccaaggaccaaaaccaaauuuuuuauauuugcaggg
((.((((((((((.((.(((((((((((((((((((((((((((((((.((((((((((((...(((((((((...(((((((...((((((..(((((((((((........)))))))))))............))))))...)))))))...)))))))))...)))))))))))).))))))))))))))))))))))))))))))).)).)))))))))))).
((.((((((((((.((.(((((((((((((((((((((((((((((((.((((((((((((...(((((((((...(((((((...((((((..(((((((((((........)))))))))))............))))))...)))))))...)))))))))...)))))))))))).))))))))))))))))))))))))))))))).)).)))))))))))).
Structure
- a u u a cau aaa cua ----------uc cgu cc ugcaaauaua aa auuUGGUUUUGGUCCUUGGUAUUUuguuuua uccuuguaaaau uucauauug uuggucc uaauau auuuuaguccu u || |||||||||| || ||||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||| |||||| ||||||||||| gg acguuuauau uu uaaaccaaaaccaggaaccauaaaacAAAAU AGGAACAUUUUA aaguauaac aaccagg auuaua uaaaaucaggg u g - u u C acu cua aac caucuuauaaac agu
Annotation confidence
Low
Do you think this miRNA is real?
Genome context
chr6: 18839111-18839338 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from mtr-MIR2630q
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature mtr-miR2630q-5p
| Accession | MIMAT0013389 |
| Description | Medicago truncatula mtr-miR2630q-5p mature miRNA |
| Sequence | 21 - UGGUUUUGGUCCUUGGUAUUU - 41 |
| Evidence |
experimental
454 [1] |
Mature mtr-miR2630q-3p
| Accession | MIMAT0054910 |
| Description | Medicago truncatula mtr-miR2630q-3p mature miRNA |
| Sequence | 168 - AUUUUACAAGGACUAAAA - 185 |
| Evidence |
experimental
unknown |
References
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