Stem-loop mtr-MIR2619b

Accession

MI0019077

Description

Medicago truncatula mtr-MIR2619b precursor miRNA

Literature search

1 open access papers mention mtr-MIR2619b
(1 sentences)

Sequence

aaacagccccAUAUGUUUUGAUUCUUUGGCAguuuuggccccccaaggcaaaauaaaaauaaaaaauuugacacauggcaccucacuuagggugccacgucagcguugaccgagucaacacugaacuggggguucaaaacugCCAAAGAAUCAAUACAUAGGGggcugauu
...(((((((.(((((.(((((((((((((((((((((.((((((..............................((((((((......))))))))..((((.((((((...)))))).))))..)))))).))))))))))))))))))))).))))).)))))))...

Structure

aaa       A     U                     c      aggcaaaauaaaaauaaaaaauuugacacauggcaccucacuuagggugccacg    c      c 
   cagcccc UAUGU UUGAUUCUUUGGCAguuuugg ccccca                                                      ucag guugac  
   ||||||| ||||| ||||||||||||||||||||| ||||||                                                      |||| |||||| g
   gucggGG AUACA AACUAAGAAACCgucaaaacu gggggu                                                      aguc caacug  
uua       G     U                     u      ----------------------------------------------------ca    a      a 

Annotation confidence Not enough data

Genome context

chr4: 7493105-7493275 [+]

Mature mtr-miR2619b-5p

• Accession: MIMAT0022203
• Description: Medicago truncatula mtr-miR2619b-5p mature miRNA
• Sequence: 11 - AUAUGUUUUGAUUCUUUGGCA - 31
• Evidence: experimental ; Illumina [1]

Mature mtr-miR2619b-3p

• Accession: MIMAT0022204
• Description: Medicago truncatula mtr-miR2619b-3p mature miRNA
• Sequence: 143 - CCAAAGAAUCAAUACAUAGGG - 163
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21762498
   Identification of drought-responsive microRNAs in Medicago truncatula by genome-wide high-throughput sequencing
   Wang T, Chen L, Zhao M, Tian Q, Zhang WH
   BMC Genomics (2011) 12:367