Accession
MI0011951
Description
Medicago truncatula
mtr-MIR2638a precursor miRNA
Sequence
16633
reads,
165.0
reads per million, 111 experiments
guuacuaaucauuccaaucugccacugcaaauauuaaucauuugacuuuugguccuaauuaguuuuuuuuugcugagaugggcuaucauuagcgacguggugccuAUGUGGCAAGUGAUGAUUGgacgaggugguuggcuuaaauaggucuuuugucccugcaaauauauaucauuugaauuuucaucccuaaaguuacuaaucagauguAAUUAGGACUAUUUUUCAAAUGAUuaauauuugcaguggcagauuggaaggauuaguaa
.(((((((((.((((((((((((((((((((((((((((((((((....((((((((((((..........(((......)))(((((((.((.((((((...)))))).)).)))))))...((((((((.....(((((....)))))))))))))..............(((((((.......................)))))))))))))))))))....)))))))))))))))))))))))))))))))))).)))))))))
.(((((((((.((((((((((((((((((((((((((((((((((....((((((((((((..........(((......)))(((((((.((.((((((...)))))).)).)))))))...((((((((.....(((((....)))))))))))))..............(((((((.......................)))))))))))))))))))....)))))))))))))))))))))))))))))))))).)))))))))
Structure
g a cuuu -------------------------------------------------------------------guuuuuuuuugcugagaugggc a g u uuacuaauc uuccaaucugccacugcaaauauuaaucauuuga ugguccuaauua uaucauu gc acgugg ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||||| || |||||| g aaugauuag aagguuagacggugacguuuauaauUAGUAAACU AUCAGGAUUAAu GUAGUGA CG UGUAuc - g UUUU guagacuaaucauugaaaucccuacuuuuaaguuuacuauauauaaacgucccuguuuucuggauaaauucgguugguggagcagGUUA A G c
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
chr5: 6758481-6758749 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from mtr-MIR2638a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature mtr-miR2638a-5p
| Accession | MIMAT0054925 |
| Description | Medicago truncatula mtr-miR2638a-5p mature miRNA |
| Sequence | 106 - AUGUGGCAAGUGAUGAUUG - 124 |
| Evidence |
experimental
unknown |
Mature mtr-miR2638a-3p
| Accession | MIMAT0013404 |
| Description | Medicago truncatula mtr-miR2638a-3p mature miRNA |
| Sequence | 211 - AAUUAGGACUAUUUUUCAAAUGAU - 234 |
| Evidence |
experimental
454 [1] |
References
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