Accession
MI0011979
Description
Medicago truncatula
mtr-MIR2652i precursor miRNA
Sequence
51722
reads,
504.0
reads per million, 111 experiments
gcgguuauggugcauaagaaaauccuuaugcacccugcauaaauccagaaauGGUUUUGGAGUACAACUCACAgaaaccauuuccacaguaaaaugguuuuggcauaauuggguugggauuuaugcaaggugcuggaaaucauuaaguacaucuaaugguuuugaaguacaacucacaaaaaccauuucugaauuUAUGCAGGGUGCAUAAGGAUUuccuuaugcaccauaaccg
.(((((((((((((((((.(((((((((((((((((((((((((.((((((((((((((((((.(((((((..((((((((((........))))))))))........))))))).............(((((.((((((((((........))))))))))..))))).)))).).))))))))))))).))))))))))))))))))))))))).)))))))))))))))))
.(((((((((((((((((.(((((((((((((((((((((((((.((((((((((((((((((.(((((((..((((((((((........))))))))))........))))))).............(((((.((((((((((........))))))))))..))))).)))).).))))))))))))).))))))))))))))))))))))))).)))))))))))))))))
Structure
g a c - - ------------------------------------------------------A ------CA cca cgguuauggugcauaag aaauccuuaugcacccugcauaaau cagaaauGGUUUU G GAGU CAACUCA gaaaccauuu c ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| | |||| ||||||| |||||||||| gccaauaccacguauuc uUUAGGAAUACGUGGGACGUAUuua gucuuuaccaaaa c cuca guugggu uuuugguaaa a - c a a a acaugaaguuuugguaaucuacaugaauuacuaaaggucguggaacguauuuagg uaauacgg aug
Annotation confidence
Low
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Genome context
chr6: 21529035-21529269 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from mtr-MIR2652i
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature mtr-miR2652i-5p
| Accession | MIMAT0054944 |
| Description | Medicago truncatula mtr-miR2652i-5p mature miRNA |
| Sequence | 53 - GGUUUUGGAGUACAACUCACA - 73 |
| Evidence |
experimental
unknown |
Mature mtr-miR2652i-3p
| Accession | MIMAT0013432 |
| Description | Medicago truncatula mtr-miR2652i-3p mature miRNA |
| Sequence | 196 - UAUGCAGGGUGCAUAAGGAUU - 216 |
| Evidence |
experimental
454 [1] |
References
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