Stem-loop mtr-MIR2614

Accession

MI0011875

Description

Medicago truncatula mtr-MIR2614 precursor miRNA

Sequence

uggaaaugaguggagucgaaccgaaccugucugagcucggcucgacuagauaagaauuuguucggcucaaaacucgacucgaguucgacacgaacuuuuuuucagcucgaauucgacuuguuuaaaguucacgaauaguuCGGUUCGACUCGUUAGGUUCa
((((..(((...((((((((((((((.((((.((((((((.((((((.(((((....))))).))........)))).)))))))))))).(((((((....(((.(((....))).)))...))))))).......)))))))))))))).)))..))))

Structure

    aa   gug              ----------------------------------------------c    u        c    --------  a     g 
ugga  uga   gagucgaaccgaac                                               uguc gagcucgg ucga        cu gauaa a
||||  |||   ||||||||||||||                                               |||| |||||||| ||||        || |||||  
aCUU  AUU   CUCAGCUUGGCuug                                               acag cuugagcu agcu        gg uuguu a
    GG   --G              auaagcacuugaaauuuguucagcuuaagcucgacuuuuuuucaagc    -        c    caaaacuc  c     u 

Annotation confidence Not enough data

Genome context

chr3: 27920429-27920589 [-]

Mature mtr-miR2614

• Accession: MIMAT0013328
• Description: Medicago truncatula mtr-miR2614 mature miRNA
• Sequence: 141 - CGGUUCGACUCGUUAGGUUC - 160
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19767456
   Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules
   "Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M"
   "Plant Cell (2009) 21:2780-2796