miRBase entry: mtr-MIR2667a

Stem-loop mtr-MIR2667a


Accession
MI0012021
Description
Medicago truncatula mtr-MIR2667a precursor miRNA


Sequence

2043 reads, 20.0 reads per million, 106 experiments
gcguugguagccaucagauCUGGAUCGUUCCUUGAUCUGACGGCUACCguauga
.(((((((((((.(((((((.(((....)))..))))))).)))))))).))).

Structure
g   -        a       -U   U 
 cgu ugguagcc ucagauC  GGA C
 ||| |||||||| |||||||  |||  
 gua gCCAUCGG AGUCUAG  CCU G
a   u        C       UU   U 


Annotation confidence High
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature mtr-miR2667a-5p

Accession MIMAT0054983
Description Medicago truncatula mtr-miR2667a-5p mature miRNA
Sequence 20 - CUGGAUCGUUCCUUGAUCUGACGG - 43
Evidence experimental
unknown

Mature mtr-miR2667a-3p

Accession MIMAT0013474
Description Medicago truncatula mtr-miR2667a-3p mature miRNA
Sequence 29 - UCCUUGAUCUGACGGCUACC - 48
Evidence experimental
454 [1]

References

  1. PubMed ID: 19767456
    Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules
    "Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M"
    "Plant Cell (2009) 21:2780-2796