Accession
MI0011952
Description
Medicago truncatula
mtr-MIR2638b precursor miRNA
Sequence
15985
reads,
173.0
reads per million, 111 experiments
guUACUAAUCCUUCCAAUCUGCCacugcaaauauuaaucauuugaaaaauaguccuaauuacaucugauuaguaacuuuagggaugaaaauucaaaugauauauauuugcagggacaaaagaccuauuuaagccaaccaccucguccaaucaucacuugccacauaggcaccacgucgcuaaugauagcccaucucagcaaaaaaaaacuaauuaggaccaaaagucaaAUGAUUAAUAUUUGCAGUGGCagauuggaaugauuaguaa
.(((((((((.((((((((((((((((((((((((((((((((((......((((((((((...((((.........))))((((((.....((((((.....)))))).(((.........)))................))))))..........((((.....)))).......((((....))))....................))))))))))......)))))))))))))))))))))))))))))))))).)))))))))
.(((((((((.((((((((((((((((((((((((((((((((((......((((((((((...((((.........))))((((((.....((((((.....)))))).(((.........)))................))))))..........((((.....)))).......((((....))))....................))))))))))......)))))))))))))))))))))))))))))))))).)))))))))
Structure
g C aaaaua ------------------------------------------caucugauuaguaacuuuag ---------------------------aaauu a uUACUAAUC UUCCAAUCUGCCacugcaaauauuaaucauuuga guccuaauua ggauga caaaug u ||||||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||| |||||| a aaugauuag aagguuagaCGGUGACGUUUAUAAUUAGUAaacu caggauuaau ccugcu guuuau u - u gaaaac caaaaaaaaacgacucuacccgauaguaaucgcugcaccacggauacaccguucacuacuaa ccaccaaccgaauuuauccagaaaacagggac a
Annotation confidence
Low
Do you think this miRNA is real?
Genome context
chr5: 6758482-6758750 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from mtr-MIR2638b
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature mtr-miR2638b-5p
| Accession | MIMAT0054926 |
| Description | Medicago truncatula mtr-miR2638b-5p mature miRNA |
| Sequence | 3 - UACUAAUCCUUCCAAUCUGCC - 23 |
| Evidence |
experimental
unknown |
Mature mtr-miR2638b-3p
| Accession | MIMAT0013405 |
| Description | Medicago truncatula mtr-miR2638b-3p mature miRNA |
| Sequence | 230 - AUGAUUAAUAUUUGCAGUGGC - 250 |
| Evidence |
experimental
454 [1] |
References
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