Stem-loop mtr-MIR2629c

Accession

MI0011914

Description

Medicago truncatula mtr-MIR2629c precursor miRNA

Sequence

28671 reads, 265.0 reads per million, 111 experiments

aAGUUUUCCUCGGUAGUUAACUgcagucgguuccauaauucgGCAGUUAACUGCCGAGGGg
......((((((((((((((((((...(((.........))))))))))))))))))))).

Structure

aAGUUU                  agu   uuc 
      UCCUCGGUAGUUAACUgc   cgg   c
      ||||||||||||||||||   |||   a
      GGGAGCCGUCAAUUGACG   gcu   u
-----g                  ---   uaa 

Annotation confidence Low

Genome context

chr4: 8596645-8596705 [+]

Mature mtr-miR2629c-5p

• Accession: MIMAT0013367
• Description: Medicago truncatula mtr-miR2629c-5p mature miRNA
• Sequence: 2 - AGUUUUCCUCGGUAGUUAACU - 22
• Evidence: experimental ; 454 [1]

Mature mtr-miR2629c-3p

• Accession: MIMAT0054888
• Description: Medicago truncatula mtr-miR2629c-3p mature miRNA
• Sequence: 43 - GCAGUUAACUGCCGAGGG - 60
• Evidence: experimental ; unknown

References

1. PubMed ID: 19767456
   Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules
   "Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M"
   "Plant Cell (2009) 21:2780-2796