Accession
MI0011973
Description
Medicago truncatula
mtr-MIR2652c precursor miRNA
Sequence
20945
reads,
205.0
reads per million, 111 experiments
gcgguuaugguguauaacgaaauccuuaugcacccugcauaaauucAGAAAUGGUUUUGGAGUACAACUuacaaaaaccauuuucccaauaaaaugguuuuugcauaauuuuaugcaaggugcuggaaauccuuaugcagaguacuggaaagcauuaaguacaacucacauaaaccauuucuggauuUAUGCAGGGUGCAUAAGGAUUuccuuaugcacuauagucg
.((((((((((((((((.(((((((((((((((((((((((((((((((((((((((((((((...(((((...((((((((((......))))))))))(((((((....))))))).(((((((....))...(.(((....))).).))))))))))...)))).)).))))))))))))))))))))))))))))))))))))))).))))))))))))))))
.((((((((((((((((.(((((((((((((((((((((((((((((((((((((((((((((...(((((...((((((((((......))))))))))(((((((....))))))).(((((((....))...(.(((....))).).))))))))))...)))).)).))))))))))))))))))))))))))))))))))))))).))))))))))))))))
Structure
g c - - ACA ----------------------------------------------------caa cc cgguuaugguguauaa gaaauccuuaugcacccugcauaaauucAGAAAUGGUUU UG GAGU ACUua aaaccauuuu c |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| ||||| |||||||||| gcugauaucacguauu cuUUAGGAAUACGUGGGACGUAUuuaggucuuuaccaaa ac cuca ugaau uuugguaaaa a - c u a aca uacgaaaggucaugagacguauuccuaaaggucguggaacguauuuuaauacguu ua
Annotation confidence
Low
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Genome context
chr2: 12812990-12813216 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from mtr-MIR2652c
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature mtr-miR2652c-5p
| Accession | MIMAT0054938 |
| Description | Medicago truncatula mtr-miR2652c-5p mature miRNA |
| Sequence | 47 - AGAAAUGGUUUUGGAGUACAACU - 69 |
| Evidence |
experimental
unknown |
Mature mtr-miR2652c-3p
| Accession | MIMAT0013426 |
| Description | Medicago truncatula mtr-miR2652c-3p mature miRNA |
| Sequence | 188 - UAUGCAGGGUGCAUAAGGAUU - 208 |
| Evidence |
experimental
454 [1] |
References
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