miRBase entry: mtr-MIR2632a

Dead hairpin entry

Stem-loop mtr-MIR2632a


Accession
MI0011943
Description
Medicago truncatula mtr-MIR2632a precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.


Sequence

24453 reads, 243.0 reads per million, 111 experiments
aggucauuugaauuuucaucccugaaguuaCUAAUCCUUCCAAUCUGCCCCUGCAaauauuaaucauuugacuuuugguccuaauuacaucugauuaguaacuuaggaccaaaagucaaaugauuaauauuugcaagggcagAUUGGAAGGAUUAGUAACUUCAGcgacgaaaauucaaauggccua
(((((((((((((((((.((.(((((((((((((((((((((((((((((.(((((((((((((((((((((((((((((((((((((.........)))).))))))))))))))))))))))))))))))))).))))))))))))))))))))))))))))).)).))))))))))))))))).

Structure
-                 a  c                             C                                 -    auc 
 aggucauuugaauuuuc uc cugaaguuaCUAAUCCUUCCAAUCUGCCC UGCAaauauuaaucauuugacuuuugguccuaa uuac   u
 ||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||   g
 uccgguaaacuuaaaag ag GACUUCAAUGAUUAGGAAGGUUAgacggg acguuuauaauuaguaaacugaaaaccaggauu aaug   a
a                 c  c                             a                                 c    auu