miRBase entry: mtr-MIR2594

Stem-loop mtr-MIR2594


Accession
MI0011830
Description
Medicago truncatula mtr-MIR2594 precursor miRNA


Sequence

ccgcuucucagugcugcuguaguuccuucggcgauguugcucaCCAUGGCCAAGGAUGCCAGAGgcacuucuacuccgu
.........((((((.(((....(((((.(((.(((........))).))))))))...))).))))))..........

Structure
-ccgcuucuc      g   uagu     c   g   uug 
          agugcu cug    uccuu ggc aug   c
          |||||| |||    ||||| ||| |||    
          ucacgG GAC    AGGAA CCG UAC   u
ugccucaucu      A   -CGU     -   G   Cac 


Annotation confidence Not enough data
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Genome context
chr4: 19673181-19673259 [+]

Database links

Mature mtr-miR2594

Accession MIMAT0013283
Description Medicago truncatula mtr-miR2594 mature miRNA
Sequence 44 - CCAUGGCCAAGGAUGCCAGAG - 64
Evidence experimental
454 [1]

References

  1. PubMed ID: 19767456
    Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules
    "Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M"
    "Plant Cell (2009) 21:2780-2796