Stem-loop mtr-MIR2636

Accession

MI0011949

Description

Medicago truncatula mtr-MIR2636 precursor miRNA

Sequence

guggguacaaggaauccacuuuauuaaacacacuaaccaaaaaacuguaauuucuaagauauguuucaaauuaagguguuUUUGGUUAGUGUGCUGAAUAUaguagauucauuguaccca
.(((((((((.(((((.(((.((((...((((((((((((((((((.((((((..((......))..)))))).))).)))))))))))))))...)))).))).))))).)))))))))

Structure

g         g     c   u    aaa               -   g      cu  ga 
 uggguacaa gaauc acu uauu   cacacuaaccaaaaa acu uaauuu  aa  u
 ||||||||| ||||| ||| ||||   ||||||||||||||| ||| ||||||  ||   
 acccauguu cuuag uga AUAA   GUGUGAUUGGUUUuu ugg auuaaa  uu  a
-         a     a   U    GUC               g   a      cu  gu 

Annotation confidence Not enough data

Genome context

chr5: 27514652-27514771 [-]

Mature mtr-miR2636

• Accession: MIMAT0013402
• Description: Medicago truncatula mtr-miR2636 mature miRNA
• Sequence: 81 - UUUGGUUAGUGUGCUGAAUAU - 101
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19767456
   Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules
   "Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M"
   "Plant Cell (2009) 21:2780-2796