Accession
MI0011852
Description
Medicago truncatula
mtr-MIR2602a precursor miRNA
Sequence
12463
reads,
105.0
reads per million, 111 experiments
acugccacaucacuaauucgaugacguggcaaucacuaccacacaugaaauuccaauuuagcccuuaagaAGAGGACAAAAUAUUGAAGAAAGAauuggaaacccagggguaaaauuagaauuucauguaUGGCAGUGAUUGCCACGUCAUcaaauuagugacauagcag
.((((....(((((((((.((((((((((((((((((.(((.(((((((((((.(((((.(((((...........(((....)))..........(((....)))))))).))))).))))))))))).))).)))))))))))))))))).)))))))))....))))
.((((....(((((((((.((((((((((((((((((.(((.(((((((((((.(((((.(((((...........(((....)))..........(((....)))))))).))))).))))))))))).))).)))))))))))))))))).)))))))))....))))
Structure
a caca c a c c a ---------uaagaAGAGGA A cugc ucacuaauu gaugacguggcaaucacu cca acaugaaauuc aauuu gcccu CAA A |||| ||||||||| |||||||||||||||||| ||| ||||||||||| ||||| ||||| ||| gacg agugauuaa cUACUGCACCGUUAGUGA GGU uguacuuuaag uuaaa ugggg GUU U - auac a C a a a acccaaagguuaAGAAAGAA A
Annotation confidence
Low
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Genome context
chr5: 13768425-13768594 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from mtr-MIR2602a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature mtr-miR2602a-5p
| Accession | MIMAT0054838 |
| Description | Medicago truncatula mtr-miR2602a-5p mature miRNA |
| Sequence | 71 - AGAGGACAAAAUAUUGAAGAAAGA - 94 |
| Evidence |
experimental
unknown |
Mature mtr-miR2602a-3p
| Accession | MIMAT0013305 |
| Description | Medicago truncatula mtr-miR2602a-3p mature miRNA |
| Sequence | 131 - UGGCAGUGAUUGCCACGUCAU - 151 |
| Evidence |
experimental
454 [1] |
References
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