Stem-loop mtr-MIR2675

Accession

MI0012043

Description

Medicago truncatula mtr-MIR2675 precursor miRNA

Sequence

acuuucaugaauaugguuuuggucccuacaaaauauuuuguuuuuuaaaaaggucccugcaaaaauuuuuguuuuugaaaauaaaauuuugcaaggaccaaaaacaaauuuuuuuuuacaaggacuaaaaccaaaaCGAGGCAUAUUUGCAGGGAUUaaaaccauauuuuagc
........(((((((((((((((((((.((((((.(((((((((.......(((((.(((((((..((((((((....))))))))))))))).)))))......................((.......))))))))))).)).)))).)))))))))))))))))))....

Structure

acuuucau                   a    -  a         --------------------------uuaaaaa     c       au        u 
        gaauaugguuuuggucccu caaa au uuuuguuuu                                 ggucc ugcaaaa  uuuuguuu u
        ||||||||||||||||||| |||| || |||||||||                                 ||||| |||||||  ||||||||  
        uuuauaccaaaaUUAGGGA GUUU UA GGAGCaaaa                                 ccagg acguuuu  aaaauaaa g
----cgau                   C    A  C         ccaaaaucaggaacauuuuuuuuuaaacaaaaa     a       --        a 

Annotation confidence Not enough data

Genome context

chr3: 35808536-35808708 [-]

Mature mtr-miR2675

• Accession: MIMAT0013496
• Description: Medicago truncatula mtr-miR2675 mature miRNA
• Sequence: 137 - CGAGGCAUAUUUGCAGGGAUU - 157
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19767456
   Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules
   "Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M"
   "Plant Cell (2009) 21:2780-2796