miRBase entry: mtr-MIR2111o

Stem-loop mtr-MIR2111o


Accession
MI0011847
Description
Medicago truncatula mtr-MIR2111o precursor miRNA
Gene family
MIPF0000754; MIR2111

Literature search
2 open access papers mention mtr-MIR2111o
(8 sentences)

Sequence

aguauugguuaaggauccggUAAUCUGCAUCCUGAGGUUUAaaacaauaaauuuauuguaucuaguccucgggaugcugauuaccuuuuccuuaugaccaauguaca
..(((((((((((((...(((((((.(((((((((((......((((((....)))))).......))))))))))).)))))))...))))..)))))))))....

Structure
--ag         --    ucc       U           -UUUAaa      a 
    uauugguua  agga   ggUAAUC GCAUCCUGAGG       acaaua a
    |||||||||  ||||   ||||||| |||||||||||       ||||||  
    guaaccagu  uccu   ccauuag cguagggcucc       uguuau u
acau         au    uuu       u           ugaucua      u 


Annotation confidence Not enough data
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Genome context
chr7: 16621471-16621577 [-]

Database links

Mature mtr-miR2111o

Accession MIMAT0013300
Description Medicago truncatula mtr-miR2111o mature miRNA
Sequence 21 - UAAUCUGCAUCCUGAGGUUUA - 41
Evidence experimental
454 [1]

References

  1. PubMed ID: 19767456
    Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules
    "Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M"
    "Plant Cell (2009) 21:2780-2796