Stem-loop mtr-MIR2606b

Accession

MI0011858

Description

Medicago truncatula mtr-MIR2606b precursor miRNA

Gene family

MIPF0000888; MIR2606

Sequence

aggagaaaacuuaggUACAAUUCCUUAGGUGCUUUUuguaugguucuuuacuaaauuuaccaugauuuccucaaaugcauaauuuucucaaaguuuguuauauccaaauaauauguauuuuuaguuaagaaccauaugaaaagcacauaaggaauuguaccuaaguuuucucca
.((((((((((((((((((((((((((.((((((((((((((((((((.((((((..(((....((((........(((.((((((...))))))))).......)))).....)))..)))))).)))))))))))))))))))).)))))))))))))))))))))))))).

Structure

a                          G                    u      uu   -caug    ccucaaau   u      c 
 ggagaaaacuuaggUACAAUUCCUUA GUGCUUUUuguaugguucuu acuaaa  uac     auuu        gca aauuuu  
 |||||||||||||||||||||||||| |||||||||||||||||||| ||||||  |||     ||||        ||| |||||| u
 ccucuuuugaauccauguuaaggaau cacgaaaaguauaccaagaa ugauuu  aug     uaaa        ugu uugaaa  
a                          a                    u      uu   uauaa    -ccuauau   -      c 

Annotation confidence Not enough data

Genome context

chr4: 46561956-46562129 [-]

Mature mtr-miR2606b

• Accession: MIMAT0013311
• Description: Medicago truncatula mtr-miR2606b mature miRNA
• Sequence: 16 - UACAAUUCCUUAGGUGCUUUU - 36
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19767456
   Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules
   "Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M"
   "Plant Cell (2009) 21:2780-2796