Stem-loop mtr-MIR2617a

Accession

MI0011881

Description

Medicago truncatula mtr-MIR2617a precursor miRNA

Gene family

MIPF0000907; MIR2617

Sequence

aUGUAGUGUAGCAUGCCCGUUuggguugaacucugauguugaauuaauuauuauuuaauuacuuuuggguaacgggguguuacacuaug
..((((((((((((.(((((...((((.(((......))).))))......(((((((......)))))))))))))))))))))))).

Structure

aU            G     -----------------------Uug    g   uc 
  GUAGUGUAGCAU CCCGU                          gguu aac  u
  |||||||||||| |||||                          |||| |||   
  uaucacauugug gggca                          uuaa uug  g
-g            -     auggguuuucauuaauuuauuauuaa    g   ua 

Annotation confidence Not enough data

Genome context

chr3: 35129122-35129210 [+]

Mature mtr-miR2617a

• Accession: MIMAT0013334
• Description: Medicago truncatula mtr-miR2617a mature miRNA
• Sequence: 2 - UGUAGUGUAGCAUGCCCGUU - 21
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19767456
   Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules
   "Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M"
   "Plant Cell (2009) 21:2780-2796