Stem-loop mtr-MIR2617b

Accession

MI0011883

Description

Medicago truncatula mtr-MIR2617b precursor miRNA

Gene family

MIPF0000907; MIR2617

Sequence

aUGUAGUGUAGCAUGCCCGUUuggugaauuacucugaugaauauuuuauauuuaauuacuuuuggguaacgggguguuacauuaua
.(((((((((((((.(((((.........(((((((((((((((...)))))).)))).....)))))))))))))))))))))))

Structure

a             G     Uuggugaau     -----    -      u 
 UGUAGUGUAGCAU CCCGU         uacuc     ugau gaauau  
 ||||||||||||| |||||         |||||     |||| |||||| u
 auauuacauugug gggca         auggg     auua uuuaua  
-             -     ---------     uuuuc    a      u 

Annotation confidence Not enough data

Genome context

chr8: 9343767-9343852 [-]

Mature mtr-miR2617b

• Accession: MIMAT0013336
• Description: Medicago truncatula mtr-miR2617b mature miRNA
• Sequence: 2 - UGUAGUGUAGCAUGCCCGUU - 21
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19767456
   Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules
   "Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M"
   "Plant Cell (2009) 21:2780-2796