miRBase entry: mtr-MIR2624

Stem-loop mtr-MIR2624


Accession
MI0011891
Description
Medicago truncatula mtr-MIR2624 precursor miRNA


Sequence

uCGAAAGACGAGGUUGCCGGCUgugugacacaaucgaucaccaguucucgaucuuguuccuc
......((((((((((..(((((.(((((......).)))))))))..))))))))))....

Structure
uCGAAA          CC     u    - ac 
      GACGAGGUUG  GGCUg guga c  a
      ||||||||||  ||||| |||| |   
      uuguucuagc  uugac cacu g  a
--cucc          uc     -    a cu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr1: 20017715-20017776 [+]

Database links

Mature mtr-miR2624

Accession MIMAT0013344
Description Medicago truncatula mtr-miR2624 mature miRNA
Sequence 2 - CGAAAGACGAGGUUGCCGGCU - 22
Evidence experimental
454 [1]

References

  1. PubMed ID: 19767456
    Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules
    "Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M"
    "Plant Cell (2009) 21:2780-2796