miRBase entry: mtr-MIR2627

Stem-loop mtr-MIR2627


Accession
MI0011895
Description
Medicago truncatula mtr-MIR2627 precursor miRNA


Sequence

ccuucggcaguuugcuaccgaaguuuuuaggcaaccggcggcaguuaacugccgaguaaaucugaacuuaaacaaUUUCGGUAGUUAACUGCUGAGGa
.(((((((((((.((((((((((((((((((....(((((((((....)))))).......)))..)))))).)))))))))))).))))))))))).

Structure
c           u            -      caac   -------      u 
 cuucggcaguu gcuaccgaaguu uuuagg    cgg       cggcag u
 ||||||||||| |||||||||||| ||||||    |||       ||||||  
 GGAGUCGUCAA UGAUGGCUUUaa aaauuc    guc       gccguc a
a           U            c      --aa   uaaauga      a 


Annotation confidence Not enough data
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Genome context
chr2: 5283120-5283217 [-]

Database links

Mature mtr-miR2627

Accession MIMAT0013348
Description Medicago truncatula mtr-miR2627 mature miRNA
Sequence 76 - UUUCGGUAGUUAACUGCUGAGG - 97
Evidence experimental
454 [1]

References

  1. PubMed ID: 19767456
    Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules
    "Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M"
    "Plant Cell (2009) 21:2780-2796