Stem-loop mtr-MIR2632a

Accession

MI0011943

Description

Medicago truncatula mtr-MIR2632a precursor miRNA

Gene family

MIPF0001203; MIR2632

Sequence

aggucauuugaauuuucaucCCUGAAGUUACUAAUCCUUCCAaucugccccugcaaauauuaaucauuugacuuuugguccuaauuacaucugauuaguaacuuaggaccaaaagucaaaugauuaauauuugcaagggcagauuggaaggauuaguaacuucagcgacgaaaauucaaauggccua
(((((((((((((((((.((.(((((((((((((((((((((((((((((.(((((((((((((((((((((((((((((((((((((.........)))).))))))))))))))))))))))))))))))))).))))))))))))))))))))))))))))).)).))))))))))))))))).

Structure

-                 a  C                             c                                 -    auc 
 aggucauuugaauuuuc uc CUGAAGUUACUAAUCCUUCCAaucugccc ugcaaauauuaaucauuugacuuuugguccuaa uuac   u
 ||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||   g
 uccgguaaacuuaaaag ag gacuucaaugauuaggaagguuagacggg acguuuauaauuaguaaacugaaaaccaggauu aaug   a
a                 c  c                             a                                 c    auu 

Annotation confidence Not enough data

Genome context

chr5: 14319353-14319539 [+]

Mature mtr-miR2632a

• Accession: MIMAT0013396
• Description: Medicago truncatula mtr-miR2632a mature miRNA
• Sequence: 21 - CCUGAAGUUACUAAUCCUUCCA - 42
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19767456
   Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules
   "Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M"
   "Plant Cell (2009) 21:2780-2796