Stem-loop mtr-MIR2639

Accession

MI0011953

Description

Medicago truncatula mtr-MIR2639 precursor miRNA

Sequence

cagaccuugaauuuaucaaggugugacagucuuacugaauugccaauacauauuggaaauuUAGUCGGCUUACGUCACCUUGauauaagugggacua
.((.(((......((((((((((((..((((..((((((((.(((((....))))).)))))))).))))..)).)))))))))).....))).)).

Structure

c  a   ugaauu          -  ac    uu        g     a 
 ag ccu      uaucaaggug ug  aguc  acugaauu ccaau c
 || |||      |||||||||| ||  ||||  |||||||| |||||  
 uc ggg      auaGUUCCAC GC  UCGG  UGAUuuaa gguua a
a  a   -ugaau          U  AU    -C        a     u 

Annotation confidence Not enough data

Genome context

chr3: 10235233-10235329 [+]

Mature mtr-miR2639

• Accession: MIMAT0013406
• Description: Medicago truncatula mtr-miR2639 mature miRNA
• Sequence: 62 - UAGUCGGCUUACGUCACCUUG - 82
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19767456
   Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules
   "Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M"
   "Plant Cell (2009) 21:2780-2796