Stem-loop bta-mir-450a-1

Accession

MI0012213

Description

Bos taurus bta-mir-450a-1 precursor miRNA mir-450

Gene
family

RF00708; mir-450

Literature search

4 open access papers mention bta-mir-450a-1
(6 sentences)

Sequence

280904 reads, 149.0 reads per million, 318 experiments

acuauUUUUGCGAUGUGUUCCUAAUAUgcaguauaaauauaUUGGGAGCAUUUUGCAUGCAUgguuuuguaucaauauacag
(((((...(((((.((((((((((((((.........)))))))))))))).)))))...)))))..(((((....))))).

Structure

-----------------     UUU     U              cag 
                 acuau   UGCGA GUGUUCCUAAUAUg   u
                 |||||   ||||| ||||||||||||||   a
                 uggUA   ACGUU UACGAGGGUUauau   u
gacauauaacuauguuu     CGU     U              aaa 

Annotation confidence High

Genome context

X: 18236376-18236457 [-]

Clustered miRNAs

6 other miRNAs are < 10 kb from bta-mir-450a-1

Mature bta-miR-450a-5p

• Accession: MIMAT0003834
• Description: Bos taurus bta-miR-450a-5p mature miRNA
• Sequence: 6 - UUUUGCGAUGUGUUCCUAAUAU - 27
• Evidence: experimental ; cloned [1]

Mature bta-miR-450a-1-3p

• Accession: MIMAT0050794
• Description: Bos taurus bta-miR-450a-1-3p mature miRNA
• Sequence: 42 - UUGGGAGCAUUUUGCAUGCAU - 62
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 19758457
   Characterization of bovine miRNAs by sequencing and bioinformatics analysis
   Jin W, Grant JR, Stothard P, Moore SS, Guan LL
   BMC Mol Biol (2009) 10:90