Stem-loop sequence bmo-mir-2763

AccessionMI0012317 (change log)
DescriptionBombyx mori miR-2763 stem-loop
Gene family MIPF0001437; mir-2763
Literature search

2 open access papers mention bmo-mir-2763
(7 sentences)

Stem-loop 
   --g        c g     u     a      ----------uu   g 
5'    gcaaugua u caaag aguga cauaau            auc u
      |||||||| | ||||| ||||| ||||||            |||  
3'    uguuguau a guuuc uuacu guauua            uag g
   gca        - g     u     c      uagauuauuauu   a
Get sequence
Deep sequencing
20 reads, 0 reads per million, 3 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (ASM15162v1; GCA_000151625.1) Overlapping transcripts
NW_004581731.1: 1485728-1485812 [+]
intergenic
Database links

Mature sequence bmo-miR-2763-5p

Accession MIMAT0013637
Previous IDsbmo-miR-2763*
Sequence

11 -  

ugcaaaguagugaacauaauuuau

 - 34

Get sequence
Deep sequencing2 reads, 1 experiments
Evidence experimental; Illumina [1-2], SOLID [3]

Mature sequence bmo-miR-2763-3p

Accession MIMAT0013638
Previous IDsbmo-miR-2763
Sequence

54 -  

uauuaugcucauuucuuuggau

 - 75

Get sequence
Deep sequencing17 reads, 2 experiments
Evidence experimental; Illumina [1-2], SOLID [3]
Database links

References

1
PMID:20199675 "MicroRNAs of Bombyx mori identified by Solexa sequencing" Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q BMC Genomics. 11:148(2010).
2
PMID:20089182 "Deep sequencing of small RNA libraries reveals dynamic regulation of conserved and novel microRNAs and microRNA-stars during silkworm development" Jagadeeswaran G, Zheng Y, Sumathipala N, Jiang H, Arrese EL, Soulages JL, Zhang W, Sunkar R BMC Genomics. 11:52(2010).
3
PMID:20229201 "Novel microRNAs in silkworm (Bombyx mori)" Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J Funct Integr Genomics. 10:405-415(2010).