Stem-loop sequence bmo-mir-2846

Accession

MI0012466 (change log)

Description

Bombyx mori miR-2846 stem-loop

Literature search

1 open access papers mention bmo-mir-2846
(1 sentences)

Stem-loop

   aauaua    -      a  aa g   ua      acg   gaa   a 
5'       ucgu gggauu cu  u gcg  gugcga   cgu   ccg g
         |||| |||||| ||  | |||  ||||||   |||   ||| a
3'       ggcg cccuga ga  a cgu  uaugcu   gca   ggu c
   gacaga    g      a  -- g   gg      -ga   -aa   g 

Deep sequencing

101 reads, 0 reads per million, 3 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (ASM15162v1; GCA_000151625.1): NW_004582028.1: 1624734-1624827 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0012466

Mature sequence bmo-miR-2846

• Accession: MIMAT0013767
• Sequence: 11 - gggauuacuaauggcguagugcg - 33
• Deep sequencing: 101 reads, 3 experiments
• Evidence: experimental; Illumina [1]
• Database links:
  • RNAcentral:URS0000259D37_7091

References

1. PMID:20199675 "MicroRNAs of Bombyx mori identified by Solexa sequencing" Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q BMC Genomics. 11:148(2010).