miRBase entry: bta-mir-378-2

Stem-loop bta-mir-378-2


Accession
MI0013052
Description
Bos taurus bta-mir-378-2 precursor miRNA
Gene family
MIPF0000168; mir-378

Literature search
24 open access papers mention bta-mir-378-2
(101 sentences)

Sequence

582221 reads, 5068 reads per million, 77 experiments
ggagagcACUGGACUUGGAGUCAGAAGGCuggagcuuacagggcagcaccgucaucuacugguggagaacuacgcc
..................(((.(((.(((.((.(((........))).))))).))))))((((........))))

Structure
ggagagcACUGGACUUGG   C   A   u  a   uac 
                  AGU AGA GGC gg gcu   a
                  ||| ||| ||| || |||    
                  uca ucu cug cc cga   g
--ccgcaucaagaggugg   -   a   -  a   cgg 


Annotation confidence Not enough data
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Genome context
chr4: 10779742-10779817 [+]

Database links

Mature bta-miR-378

Accession MIMAT0009305
Description Bos taurus bta-miR-378 mature miRNA
Sequence 8 - ACUGGACUUGGAGUCAGAAGGC - 29
Evidence experimental
cloned [1]

References

  1. PubMed ID: 19765282
    Identification and characterization of miRNAs expressed in the bovine ovary
    Hossain MM, Ghanem N, Hoelker M, Rings F, Phatsara C, Tholen E, Schellander K, Tesfaye D
    BMC Genomics (2009) 10:443