Identification and characterization of miRNAs expressed in the bovine ovary |
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|---|---|
| PubMed ID | 19765282 |
| Authors | Hossain MM, Ghanem N, Hoelker M, Rings F, Phatsara C, Tholen E, Schellander K, Tesfaye D |
| Journal | BMC Genomics |
| Volume | 10 |
| Pages | 443 |
| Name | Accession | RPM | Chromosome | Start | End | Strand | Confidence |
|---|---|---|---|---|---|---|---|
| bta-mir-424 | MI0012212 | 90 | X | 18242745 | 18242840 | - | High |
| bta-mir-193a-2 | MI0013051 | None | 14 | 1077714 | 1077766 | - | - |
| bta-mir-378-2 | MI0013052 | 5068 | 4 | 10883955 | 10884030 | + | - |
| bta-mir-669 | MI0013053 | 0 | 16 | 61760912 | 61760975 | - | - |
| bta-mir-2881 | MI0013054 | 0 | 7 | 12640463 | 12640533 | + | - |
| bta-mir-2882 | MI0013055 | None | 7 | 15441086 | 15441143 | + | - |
| bta-mir-2883 | MI0013056 | None | 18 | 8132119 | 8132183 | + | - |
| bta-mir-2885 | MI0013058 | 1 | 29 | 40047044 | 40047101 | - | - |
| bta-mir-2886 | MI0013059 | 0 | 19 | 37905897 | 37905971 | + | - |
| bta-mir-2887-1 | MI0013060 | 1048 | 18 | 59227371 | 59227427 | + | Medium |
| bta-mir-2887-2 | MI0013061 | 1048 | 27 | 6217555 | 6217611 | - | Medium |
| bta-mir-2888-1 | MI0013062 | 0 | 21 | 35742333 | 35742397 | + | - |
| bta-mir-2888-2 | MI0013063 | 0 | 22 | 57733489 | 57733556 | + | - |
| bta-mir-2889 | MI0013064 | 0 | 20 | 18050883 | 18050943 | - | - |
| bta-mir-2890 | MI0013065 | 1 | 25 | 39296074 | 39296149 | + | Medium |
| bta-mir-2891 | MI0013066 | 0 | 28 | 28492877 | 28492964 | + | - |
| bta-mir-2892 | MI0013067 | 4 | chr12 | 81731989 | 81732092 | - | Low |
| bta-mir-2893 | MI0013068 | None | 17 | 71364813 | 71364873 | + | - |
| bta-mir-2894 | MI0013069 | None | 5 | 119534097 | 119534178 | - | - |
| bta-mir-2895 | MI0013070 | None | 26 | 11974592 | 11974677 | + | - |
| bta-mir-2896 | MI0013071 | None | 16 | 50529895 | 50529951 | + | - |
| bta-mir-2897 | MI0013072 | None | 18 | 53789899 | 53789967 | + | - |
| bta-mir-2898 | MI0013073 | None | 8 | 73387174 | 73387250 | + | - |
| bta-mir-2899 | MI0013074 | None | 18 | 42055707 | 42055774 | + | - |
| bta-mir-2900 | MI0013075 | 2 | 18 | 64108770 | 64108823 | - | - |
| bta-mir-2901 | MI0013076 | None | 18 | 40295453 | 40295535 | + | - |
| bta-mir-2902 | MI0013077 | 0 | 3 | 117347056 | 117347120 | + | - |
| bta-mir-2903 | MI0013079 | 4 | 9 | 60812926 | 60813013 | + | - |
| bta-mir-2904-1 | MI0013080 | 1158 | chr2 | 66499624 | 66499693 | + | Low |
| bta-mir-2904-2 | MI0013081 | 1158 | chr3 | 53704423 | 53704492 | + | Low |
| bta-mir-2904-3 | MI0013082 | 1158 | chr3 | 53705747 | 53705816 | + | Low |
| bta-mir-3600 | MI0015943 | 0 | 19 | 22811570 | 22811650 | + | Medium |
| bta-mir-148c | MI0015944 | 1 | 19 | 38444482 | 38444552 | - | Medium |
| bta-mir-3578 | MI0015945 | None | 21 | 65943520 | 65943605 | - | Medium |
| bta-mir-409b | MI0015946 | 0 | 21 | 65953893 | 65953971 | - | Medium |
| bta-mir-3601 | MI0015947 | 0 | X | 18237449 | 18237526 | + | Medium |
| bta-mir-3602 | MI0015948 | None | None | None | - | ||
| bta-mir-26c | MI0015949 | None | 22 | 11420440 | 11420529 | - | Medium |
| bta-mir-3604-1 | MI0015950 | 3 | 7 | 15283408 | 15283485 | + | Medium |
| bta-mir-3604-2 | MI0015951 | 1 | 11 | 98855756 | 98855828 | + | Medium |
| bta-mir-3596 | MI0015952 | 7 | 5 | 116409213 | 116409295 | - | Medium |
| bta-mir-29a | MI0004733 | 1228 | 4 | 94636467 | 94636530 | - | High |
| bta-let-7f-2 | MI0004734 | 15341 | X | 90986550 | 90986632 | - | High |
| bta-mir-101-2 | MI0004735 | 1087 | 8 | 39689029 | 39689107 | - | High |
| bta-mir-18a | MI0004740 | 61 | 12 | 65689560 | 65689630 | + | High |
| bta-mir-21 | MI0004742 | 17881 | 19 | 10803472 | 10803543 | + | High |
| bta-mir-222 | MI0004744 | 655 | X | 98125921 | 98126030 | + | High |
| bta-mir-27a | MI0004746 | 1180 | 7 | 11838877 | 11838954 | + | High |
| bta-mir-125b-1 | MI0004753 | 1129 | 15 | 32763901 | 32763988 | - | High |
| bta-mir-126 | MI0004754 | 6131 | 11 | 104085473 | 104085545 | + | High |
| bta-mir-145 | MI0004756 | 2141 | 7 | 60813550 | 60813637 | + | High |
| bta-mir-199a-1 | MI0004758 | 3207 | 16 | 39625344 | 39625447 | - | High |
| bta-mir-27b | MI0004760 | 20982 | 8 | 81617240 | 81617336 | + | High |
| bta-mir-106a | MI0005005 | 46 | X | 17976329 | 17976409 | - | High |
| bta-mir-10a | MI0005007 | 29380 | 19 | 37912303 | 37912411 | + | High |
| bta-mir-140 | MI0005010 | 2906 | 18 | 36962013 | 36962106 | + | High |
| bta-mir-15b | MI0005012 | 173 | 1 | 107073765 | 107073862 | - | High |
| bta-mir-193a | MI0005014 | 276 | 19 | 18474461 | 18474541 | - | High |
| bta-mir-487a | MI0005022 | 9 | 21 | 65940511 | 65940590 | + | High |
| bta-mir-92a-2 | MI0005024 | 4598 | X | 17975659 | 17975726 | - | High |
| bta-let-7d | MI0005026 | 807 | 8 | 85452957 | 85453043 | + | High |
| bta-mir-132 | MI0005028 | 58 | 19 | 23070707 | 23070807 | - | High |
| bta-mir-17 | MI0005031 | 256 | 12 | 65689417 | 65689500 | + | High |
| bta-mir-181c | MI0005032 | 403 | 7 | 11811457 | 11811553 | - | High |
| bta-mir-199b | MI0005036 | 3339 | 11 | 98855737 | 98855836 | - | High |
| bta-mir-22 | MI0005041 | 17980 | 19 | 22811568 | 22811652 | - | High |
| bta-mir-29b-2 | MI0005043 | 379 | 16 | 75577046 | 75577126 | + | High |
| bta-mir-29c | MI0005044 | 719 | 16 | 75577606 | 75577693 | + | High |
| bta-let-7g | MI0005051 | 2040 | 22 | 48636407 | 48636489 | + | High |
| bta-mir-24-2 | MI0005053 | 562 | 7 | 11839032 | 11839103 | + | High |
| bta-let-7a-1 | MI0005057 | 11865 | 8 | 85450397 | 85450476 | + | High |
| bta-mir-487b | MI0005060 | 42 | 21 | 65934193 | 65934276 | + | High |
| bta-let-7f-1 | MI0005062 | 15133 | 8 | 85450750 | 85450836 | + | High |
| bta-let-7i | MI0005065 | 3806 | 5 | 50983054 | 50983137 | - | High |
| bta-mir-23b | MI0005066 | 1056 | 8 | 81617032 | 81617091 | + | High |
| bta-let-7a-2 | MI0005451 | 11827 | 15 | 32812703 | 32812774 | - | High |
| bta-let-7a-3 | MI0005452 | 11878 | 5 | 116408410 | 116408483 | + | High |
| bta-let-7b | MI0005453 | 4232 | 5 | 116409210 | 116409290 | + | High |
| bta-let-7c | MI0005454 | 1399 | 1 | 20434617 | 20434700 | - | High |
| bta-let-7e | MI0005455 | 535 | 18 | 57689058 | 57689136 | + | High |
| bta-mir-125b-2 | MI0005457 | 1232 | 1 | 20385501 | 20385585 | - | High |
| bta-mir-101-1 | MI0009721 | 1082 | 3 | 80335436 | 80335518 | + | High |
| bta-mir-106b | MI0009724 | 247 | 25 | 36355563 | 36355642 | + | High |
| bta-mir-143 | MI0009743 | 223303 | 7 | 60812121 | 60812221 | + | High |
| bta-mir-152 | MI0009748 | 219 | 19 | 38444475 | 38444560 | + | High |
| bta-mir-24-1 | MI0009761 | 551 | 8 | 81617794 | 81617861 | + | High |
| bta-mir-199a-2 | MI0009770 | 3202 | 7 | 15283412 | 15283482 | - | High |
| bta-mir-212 | MI0009776 | 30 | 19 | 23071137 | 23071247 | - | High |
| bta-mir-29d | MI0009788 | 302 | 16 | 75660913 | 75661000 | + | High |
| bta-mir-378-1 | MI0009819 | 4644 | 7 | 61076253 | 61076318 | + | High |
| bta-mir-382 | MI0009822 | 30 | 21 | 65943525 | 65943600 | + | High |
| bta-mir-409a | MI0009824 | 378 | 21 | 65953893 | 65953971 | + | High |
| bta-mir-615 | MI0009877 | 25 | 5 | 25998827 | 25998919 | - | High |
| bta-mir-631 | MI0009879 | None | 21 | 33466498 | 33466572 | + | - |
| bta-mir-92a-1 | MI0009905 | 5255 | 12 | 65690118 | 65690195 | + | High |
| bta-mir-92b | MI0009906 | 396 | 3 | 15425799 | 15425894 | - | High |
| bta-mir-29e | MI0010454 | 287 | 16 | 75577046 | 75577126 | + | High |
| bta-mir-29b-1 | MI0010464 | 359 | 4 | 94636842 | 94636922 | - | High |
| bta-mir-199c | MI0011364 | 158 | 19 | 26131673 | 26131748 | + | - |
| bta-mir-542 | MI0012214 | 92 | X | 18237439 | 18237535 | - | High |
| bta-mir-574 | MI0021122 | 55 | 18 | 62846574 | 62846640 | - | - |
| bta-mir-652 | MI0021123 | 79 | X | 58480886 | 58480983 | + | High |
| bta-mir-378b | MI0022279 | 286 | 15 | 30197485 | 30197582 | + | - |
| bta-mir-378c | MI0022299 | 749 | 24 | 31436256 | 31436324 | - | - |
| bta-mir-503 | MI0022315 | 556 | X | 18242401 | 18242483 | - | High |
| bta-mir-378d | MI0031501 | 115 | 19 | 8484500 | 8484590 | - | - |