Stem-loop bta-mir-2890

Accession

MI0013065

Description

Bos taurus bta-mir-2890 precursor miRNA

Literature search

1 open access papers mention bta-mir-2890
(2 sentences)

Sequence

72883 reads, 293.0 reads per million, 74 experiments

cggcggCCGGGAAAGGUGGGCUGGGCUccggggccccuccccgcccggugcuGCCCCGGCCGCUCCCGGCCUugug
....((((((((..(((((((..(((.(((((...........))))).)))))))..)))..)))))))).....

Structure

-cggc        AA   --    UG   U     gccc 
     ggCCGGGA  GGU  GGGC  GGC ccggg    c
     ||||||||  |||  ||||  ||| |||||    u
     CCGGCCCU  CCG  CCCG  ucg ggccc    c
guguU        CG   GC    --   u     gccc 

Annotation confidence Medium

Genome context

25: 39296074-39296149 [+]

Mature bta-miR-2890-5p

• Accession: MIMAT0050959
• Description: Bos taurus bta-miR-2890-5p mature miRNA
• Sequence: 7 - CCGGGAAAGGUGGGCUGGGCU - 27
• Evidence: experimental ; cloned [1]

Mature bta-miR-2890-3p

• Accession: MIMAT0013848
• Description: Bos taurus bta-miR-2890-3p mature miRNA
• Sequence: 53 - GCCCCGGCCGCUCCCGGCCU - 72
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 19765282
   Identification and characterization of miRNAs expressed in the bovine ovary
   Hossain MM, Ghanem N, Hoelker M, Rings F, Phatsara C, Tholen E, Schellander K, Tesfaye D
   BMC Genomics (2009) 10:443