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miRBase entry: bta-mir-669
How is the hairpin structure generated?
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We have generated a dot-bracket structure for each sequence using RNAfold.
Unambiguous secondary structure.
Parsed and ASCII art drawn.
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Stem-loop
bta-mir-669
Accession
MI0013053
Description
Bos taurus
bta-mir-669 precursor miRNA
Literature search
1 open access papers
mention bta-mir-669
(1 sentences)
Sequence
Copy Sequence
agagugUGUGGGUGUGUGCAUGUGCGUGugugcacaugcauauguguguggcuaucuuagcugu
.............((((((((((((......))))))))))))......(((((...)))))..
Structure
--------agagugUGUGGGU GU GUGUGCAUGUGC G |||||||||||| uauacguacacg u ugucgauucuaucggugugug ug
Annotation confidence
Low
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Genome context
chr16: 63452529-63452592 [-]
Database links
References
PubMed ID:
19765282
Identification and characterization of miRNAs expressed in the bovine ovary
Hossain MM, Ghanem N, Hoelker M, Rings F, Phatsara C, Tholen E, Schellander K, Tesfaye D
BMC Genomics (2009) 10:443