Stem-loop bta-mir-3601

Accession

MI0015947

Description

Bos taurus bta-mir-3601 precursor miRNA

Literature search

1 open access papers mention bta-mir-3601
(1 sentences)

Sequence

242796 reads, 148.0 reads per million, 90 experiments

cccagaccUUUCAGUUAUCAAUCUGUCACAagugcacagugguaUCUCGUGACAUGAUGAUCCCCGAgaugucugagg
(((((((.((((.(..((((.((((((((.(((((......))).)).)))))).))))))..).)))).))))).))

Structure

  -     c    A UU    A  -      A  -   ac 
cc cagac UUUC G  AUCA UC UGUCAC ag ugc  a
|| ||||| |||| |  |||| || |||||| || |||   
gg gucug agAG C  UAGU AG ACAGUG UC aug  g
  a     u    C CC    -  U      C  U   gu 

Annotation confidence Medium

Genome context

X: 18237449-18237526 [+]

Clustered miRNAs

6 other miRNAs are < 10 kb from bta-mir-3601

Mature bta-miR-3601-5p

• Accession: MIMAT0050967
• Description: Bos taurus bta-miR-3601-5p mature miRNA
• Sequence: 9 - UUUCAGUUAUCAAUCUGUCACA - 30
• Evidence: experimental ; cloned [1]

Mature bta-miR-3601-3p

• Accession: MIMAT0016936
• Description: Bos taurus bta-miR-3601-3p mature miRNA
• Sequence: 45 - UCUCGUGACAUGAUGAUCCCCGA - 67
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 19765282
   Identification and characterization of miRNAs expressed in the bovine ovary
   Hossain MM, Ghanem N, Hoelker M, Rings F, Phatsara C, Tholen E, Schellander K, Tesfaye D
   BMC Genomics (2009) 10:443