Stem-loop bta-mir-378c

Accession

MI0022299

Description

Bos taurus bta-mir-378c precursor miRNA

Literature search

28 open access papers mention bta-mir-378c
(124 sentences)

Sequence

2016936 reads, 1426.0 reads per million, 321 experiments

caaaaccaccACUGGACUUGGAGUCAGAAGUuccaugugugagucuugguagggccaguggauugcuaa
........((((((((((.(((.(((.(.........).))).))).)))....)))))))........

Structure

caaaacca       ----   U   G   G AGU 
        ccACUGG    ACU GGA UCA A   u
        |||||||    ||| ||| ||| |   c
        ggugacc    ugg ucu agu u   c
aaucguua       ggga   u   g   g gua 

Annotation confidence Not enough data

Genome context

24: 31436256-31436324 [-]

Mature bta-miR-378c-5p

• Accession: MIMAT0025551
• Description: Bos taurus bta-miR-378c-5p mature miRNA
• Sequence: 11 - ACUGGACUUGGAGUCAGAAGU - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21912509
   Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
   "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
   "Int J Biol Sci (2011) 7:1016-1026