Stem-loop bta-mir-2887-1

Accession

MI0013060

Description

Bos taurus bta-mir-2887-1 precursor miRNA

Literature search

4 open access papers mention bta-mir-2887-1
(5 sentences)

Sequence

4875 reads, 1048 reads per million, 75 experiments

cguCGGGACCGGGGUCCGGUGCGgagagcccuucgucccgggacacggggcgcggcc
.((((.(.(((...(((((.((((((....)))))).)))))...)))..).)))).

Structure

c    G -A   GGG     U      a 
 guCG G  CCG   UCCGG GCGgag g
 |||| |  |||   ||||| ||||||  
 cggc c  ggc   gggcc ugcuuc c
c    g gg   aca     c      c 

Annotation confidence Not enough data

Genome context

chr2: 66499737-66499793 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-2887-1

Mature bta-miR-2887

• Accession: MIMAT0013845
• Description: Bos taurus bta-miR-2887 mature miRNA
• Sequence: 4 - CGGGACCGGGGUCCGGUGCG - 23
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 19765282
   Identification and characterization of miRNAs expressed in the bovine ovary
   Hossain MM, Ghanem N, Hoelker M, Rings F, Phatsara C, Tholen E, Schellander K, Tesfaye D
   BMC Genomics (2009) 10:443