Stem-loop bta-mir-378-2

Accession

MI0013052

Description

Bos taurus bta-mir-378-2 precursor miRNA

Gene family

MIPF0000168; mir-378

Literature search

24 open access papers mention bta-mir-378-2
(101 sentences)

Sequence

582221 reads, 5068 reads per million, 77 experiments

ggagagcACUGGACUUGGAGUCAGAAGGCuggagcuuacagggcagcaccgucaucuacugguggagaacuacgcc
..................(((.(((.(((.((.(((........))).))))).))))))((((........))))

Structure

ggagagcACUGGACUUGG   C   A   u  a   uac 
                  AGU AGA GGC gg gcu   a
                  ||| ||| ||| || |||    
                  uca ucu cug cc cga   g
--ccgcaucaagaggugg   -   a   -  a   cgg 

Annotation confidence Not enough data

Genome context

chr4: 10779742-10779817 [+]

Mature bta-miR-378

• Accession: MIMAT0009305
• Description: Bos taurus bta-miR-378 mature miRNA
• Sequence: 8 - ACUGGACUUGGAGUCAGAAGGC - 29
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 19765282
   Identification and characterization of miRNAs expressed in the bovine ovary
   Hossain MM, Ghanem N, Hoelker M, Rings F, Phatsara C, Tholen E, Schellander K, Tesfaye D
   BMC Genomics (2009) 10:443