Stem-loop bta-mir-3600

Accession

MI0015943

Description

Bos taurus bta-mir-3600 precursor miRNA

Literature search

2 open access papers mention bta-mir-3600
(2 sentences)

Sequence

968575 reads, 0 reads per million, 78 experiments

cagagggcaACAGUUCUUCAACUGGCAGCUUuagcugggucaggacauaaagcuugccacugaagaacuacugcggcucag
..(((.(((..(((((((((..((((((((((((((......)).).)))))).))))).)))))))))..)))..)))..

Structure

ca   -g   AC         AC     -      - -  gg 
  gag  gca  AGUUCUUCA  UGGCA GCUUua g cu  g
  |||  |||  |||||||||  ||||| |||||| | ||   
  cuc  cgu  ucaagaagu  accgu cgaaau c gg  u
ga   gg   ca         -c     u      a a  ac 

Annotation confidence Not enough data

Genome context

chr19: 23514299-23514379 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-3600

Mature bta-miR-3600

• Accession: MIMAT0016932
• Description: Bos taurus bta-miR-3600 mature miRNA
• Sequence: 10 - ACAGUUCUUCAACUGGCAGCUU - 31
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 19765282
   Identification and characterization of miRNAs expressed in the bovine ovary
   Hossain MM, Ghanem N, Hoelker M, Rings F, Phatsara C, Tholen E, Schellander K, Tesfaye D
   BMC Genomics (2009) 10:443