Stem-loop bta-mir-26c

Accession

MI0015949

Description

Bos taurus bta-mir-26c precursor miRNA

Literature search

10 open access papers mention bta-mir-26c
(13 sentences)

Sequence

28095621 reads, 15125.0 reads per million, 128 experiments

caggcccgcguccgCGUGCAAGUAACCGAGAAUAGGccccuugggaccugcacAGCCUAUCCUGGAUUACUUGAAcgaggccacggccuu
.(((((.(.(.((.(((.(((((((.(.((.((((((....((.......))..)))))).)).).))))))).))).)).).)))))).

Structure

c     c c u  g   G       C G  A      cccu  gg 
 aggcc g g cc CGU CAAGUAA C AG AUAGGc    ug  a
 ||||| | | || ||| ||||||| | || ||||||    ||  c
 uccgg c c gg gcA GUUCAUU G UC UAUCCG    ac  c
u     - a c  a   A       A G  C      --Ac  gu 

Annotation confidence Medium

Genome context

22: 11420440-11420529 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-26c

Mature bta-miR-26c-5p

• Accession: MIMAT0050968
• Description: Bos taurus bta-miR-26c-5p mature miRNA
• Sequence: 15 - CGUGCAAGUAACCGAGAAUAGG - 36
• Evidence: experimental ; cloned [1]

Mature bta-miR-26c-3p

• Accession: MIMAT0016938
• Description: Bos taurus bta-miR-26c-3p mature miRNA
• Sequence: 54 - AGCCUAUCCUGGAUUACUUGAA - 75
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 19765282
   Identification and characterization of miRNAs expressed in the bovine ovary
   Hossain MM, Ghanem N, Hoelker M, Rings F, Phatsara C, Tholen E, Schellander K, Tesfaye D
   BMC Genomics (2009) 10:443